FMO05192.5prime Sequence
748 bp (748 high quality bases) assembled on 2008-08-22
> FMO05192.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCAACAAAGT
GCTGCGAAAGGTGACGCACTGCGTCTTCGACATGGACGGTCTGCTGCTGG
ACACCGAACGCCTTTATACTGTGGCCACCGAAATGATCCTCGAGCCCTAC
GGCAAGACATATCCCTTTGAGATCAAGGAGCAGGTCATGGGCCTGCAGAC
GGAACCGCTGGCCCGGTTCATGGTCGAGCACTACGAGCTGCCGATGTCGT
GGGAGGAGTACGCACGCCAGCAGCGCGCCAACACCGAGATCCTGATGCGG
AACGCCCAGTTGATGCCAGGTGCTGAGCGCCTGCTGCGTCACCTGCACGC
CAACAAGGTACCCTTTTGCTTGGCCACCAGCTCCGGCGCCGACATGGTCG
AGCTGAAGACGGCCCAACATCGGGAGCTGTTCTCCCTGTTTAACCACAAG
GTGTGCGGTTCGTCGGACAAGGAGGTGGTCAACGGCAAGCCTGCGCCCGA
CATTTTCCTAGTGGCCGCCGGCAGATTCGGTGTGCCGCCCAAACCGTCCG
ACTGCCTGGTGTTCGAGGACTCGCCGAACGGCGTGACGGCTGCCAACAGC
GCCGGAATGCAGGTGGTGATGGTGCCGGACCCACGACTGTCCCAGGAAAA
GACCTCGCACGCCACACAAGTGCTGGCCTCGTTTGGCGGACTTCAAGCCG
GAGCAGTTCGGGCTGCCCGCCTTCACGGATGCAAGCTTTCTAGACCAT
FMO05192.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gs1l-RA | 984 | CG15441-RA | 152..848 | 33..730 | 3450 | 99.7 | Plus |
| Gs1l-RB | 1038 | CG15441-RB | 435..846 | 318..730 | 2040 | 99.8 | Plus |
| Gs1l-RB | 1038 | CG15441-RB | 150..221 | 33..104 | 345 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4455329..4455740 | 730..318 | 2015 | 99.8 | Minus |
| 2L | 23513712 | 2L | 4456112..4456333 | 321..100 | 1110 | 100 | Minus |
| 2L | 23513712 | 2L | 4456386..4456453 | 100..33 | 325 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:28:34 has no hits.
FMO05192.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:03 Download gff for
FMO05192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gs1l-RA | 152..855 | 33..738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:13:54 Download gff for
FMO05192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gs1l-RA | 167..870 | 33..738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:41 Download gff for
FMO05192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gs1l-RA | 152..855 | 33..738 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:41 Download gff for
FMO05192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4455322..4455738 | 320..738 | 99 | <- | Minus |
| 2L | 4456114..4456332 | 101..319 | 100 | <- | Minus |
| 2L | 4456386..4456453 | 33..100 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:03 Download gff for
FMO05192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4455322..4455738 | 320..738 | 99 | <- | Minus |
| arm_2L | 4456114..4456332 | 101..319 | 100 | <- | Minus |
| arm_2L | 4456386..4456453 | 33..100 | 98 | | Minus |
