FMO05193.5prime Sequence
701 bp (504 high quality bases) assembled on 2008-08-22
> FMO05193.5prime
GAAGTTATCAGTCGACATGTTCATTTTTCCCTCCCGTTTGTTCAAATCGT
GATTTCTAATGTCATAAGGAGTCTCAAGCGCCGTCTCGCTTCCCCCTGAA
AATGTCCGATGACCTGGACGAGCTCTTCCTGACGCCCATTCCGGCGCCCT
CGGCCGTGGAGCTGCAGCAGTGCATACTGTTCGGCTTCCGGCGCCGCCTT
CATCCCGCCCAGATATTCGAGGAGTGCCGCAACGCCTTTGGGCCCTTCTG
CCCCAGTGCGCAGTACGTGTATATAGGGGTACCAGCGGTTCCAGGACGGC
TTCTTCAATCTGGACGAGAAGGACGACGAGGAGCTGAGGATCGGGTATGG
CGGCACGCCCACCACCTGCAGTGATTACGATGATGACAGTGATTGCGGGG
AGGCGACCGTTCTGCCCCTGATCCTAAGTGAAATGATCCAACGCACTGAG
GAGGATGACGATGATGATGGTACTGATGGTTTTGAGAAGGAGAGTGATGA
TGGTCTAGATGGTATGTGATTGGTTATTGGCAGGGTTATGGCTATTTGGG
TGGCAAGCAAGGTATAGTTGGTCTGGAACTAAACTTTGAAACTCGGCTTG
CAAGCTGCCCCCCGCTGCCCGAATTCTCTCATCGGCTTCAACAAGTTACT
GTGCTCCGATTTCGGGAACTCCTGAGTGATGTGGAAAGGAAAAAATAACT
G
FMO05193.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:15:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31038-RC | 2039 | CG31038-RC | 74..754 | 17..699 | 2915 | 95.9 | Plus |
| CG31038-RG | 2369 | CG31038-RG | 443..1084 | 55..699 | 2775 | 96.1 | Plus |
| CG31038-RH | 2015 | CG31038-RH | 74..730 | 17..699 | 2590 | 93 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:15:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29896698..29897229 | 56..585 | 2285 | 97 | Plus |
| 3R | 32079331 | 3R | 29897302..29897396 | 588..686 | 270 | 91.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:15:45 has no hits.
FMO05193.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:03 Download gff for
FMO05193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31038-RC | 66..756 | 9..701 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:13:56 Download gff for
FMO05193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31038-RC | 64..754 | 9..701 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:29 Download gff for
FMO05193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31038-RC | 66..756 | 9..701 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:29 Download gff for
FMO05193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29895054..29895093 | 17..55 | 92 | -> | Plus |
| 3R | 29896698..29897229 | 56..585 | 96 | -> | Plus |
| 3R | 29897300..29897410 | 586..701 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:03 Download gff for
FMO05193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25720776..25720815 | 17..55 | 92 | -> | Plus |
| arm_3R | 25722420..25722951 | 56..585 | 96 | -> | Plus |
| arm_3R | 25723022..25723132 | 586..701 | 91 | | Plus |
