FMO05195.5prime Sequence
484 bp (162 high quality bases) assembled on 2008-08-22
> FMO05195.5prime
CGAAGTTATCAGTCGACATGTATATGAAAGCTTTAATATTCAGCATACTT
GTGGCCTTTGTGTGTGTGCAAATTGCTGATTTCCTGAAGTGTTACACCTG
CGTAACGCCAAATGACTGCAAGAGTCCCAAGAAAGTCACCTGCACGAATG
CGGCTGCGAATGAAACTCGTTACTACCTGGGTGTCTATCTTCAGAATGTT
GGCATCCTAACCAGCACGCGATTCGATTGCCTGGCTCTGAAGTACAACTG
GAATAACGATGTGATCCATCAGCTCCATGGCTGTGTGCATCCTAATGTTG
GAGCCTGCAGCTTATCACTTAAGCCGGCCTATGCTCACTACAATAAGACC
TGGTGTCTCTCCTGTTCGGGCGACAAGTGCTACAAGAATCCGGCCGGAAA
GATGAGCAGCAACACTATTGCCATCGCATATAGCGTTCTGGGTCTCTTGC
TGATCAAATTTATGCCGCATGCTTTCTATACCAT
FMO05195.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:15:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13102-RB | 1835 | CG13102-RB | 77..526 | 18..466 | 1985 | 96.2 | Plus |
| CG13102-RA | 576 | CG13102-RA | 77..526 | 18..466 | 1985 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:15:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9012626..9012830 | 253..457 | 905 | 96.1 | Plus |
| 2L | 23513712 | 2L | 9012384..9012561 | 75..252 | 800 | 96.6 | Plus |
| 2L | 23513712 | 2L | 9012264..9012325 | 18..79 | 280 | 96.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:15:38 has no hits.
FMO05195.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:01 Download gff for
FMO05195.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13102-RA | 77..526 | 18..466 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:13:40 Download gff for
FMO05195.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13102-RA | 72..521 | 18..466 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:26 Download gff for
FMO05195.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13102-RA | 77..526 | 18..466 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:26 Download gff for
FMO05195.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9012264..9012321 | 18..75 | 98 | -> | Plus |
| 2L | 9012385..9012561 | 76..252 | 96 | -> | Plus |
| 2L | 9012626..9012825 | 253..452 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:01 Download gff for
FMO05195.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9012264..9012321 | 18..75 | 98 | -> | Plus |
| arm_2L | 9012385..9012561 | 76..252 | 96 | -> | Plus |
| arm_2L | 9012626..9012825 | 253..452 | 96 | -> | Plus |
