FMO05204.5prime Sequence
784 bp (784 high quality bases) assembled on 2008-08-22
> FMO05204.5prime
AGCATACATTATACGAAGTTATCAGTCGACATGGTCGAGAAAACAGAAAT
GTCGAAATTCGTTGGCGTTGCCGACATAACCGAGAACAAGAAAATCTGGC
GCATGCTGCTCGGCGAACTGGTGGGCACATTTTTCTTGATCTTCGTCGGC
GTTGGCAGCACGACGAGCGGAAGTGTACCACAAATCGCATTCACCTTTGG
CTTGACGGTGGCCACCATCGCCCAGGGCTTGGGCCACCTCAGTGGCTGTC
ACATTAATCCGGCGGTCACCCTTGGATTCCTGATCGTTGGTGAGATCAGC
ATTCTGAAGGCTGCCTTCTACATCATCGTCCAATGCGTGGGCGCCATTGC
TGGAGCGGCTGTGATAAAGGTGGCACTCGATGGAGTGGCTGGTGGCGACC
TGGGAGTATCCTCCTTTGATCCCTCCCTGAACTGTGCACAGGCGGTGCTG
ATCGAAGCGCTGATCACCTTTATTTTGGTTTTCGTGGTCAAGGCTGTTTC
GGATCCTGGACGCCAGGATATCAAGGGATCAGCGCCACTGGCTGTTGGTT
TGGCCATCGCCGCTGGCCATTTGTGTGCAATCAAACTGAGCGGTGCCAGC
ATGAATCCCGCCCGGTCCTTTGGTCCCGCCGTAGTGCAGGGCGTCTGGAC
CTATCACTGGGTTTACTGGGTGGGTCCCATTGCCGGCGGCCTGTTGGCCG
GAATCATCTACAGATTAATCTTCAAGGTACGCAAGGGCGATGATGAGACC
GACTCGTACGACTTTCGCAAGCTTTCTAGACCAT
FMO05204.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Drip-RB | 1444 | CG9023-RB | 277..1010 | 31..764 | 3670 | 100 | Plus |
| Drip-RA | 1745 | CG9023-RA | 578..1311 | 31..764 | 3670 | 100 | Plus |
| Drip-RE | 1180 | CG9023-RE | 27..746 | 45..764 | 3600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11412632..11412988 | 579..223 | 1785 | 100 | Minus |
| 2R | 25286936 | 2R | 11412390..11412574 | 764..580 | 925 | 100 | Minus |
| 2R | 25286936 | 2R | 11421257..11421439 | 226..44 | 915 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:43:39 has no hits.
FMO05204.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:13 Download gff for
FMO05204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Drip-RA | 571..1315 | 23..770 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:15:04 Download gff for
FMO05204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Drip-RB | 246..990 | 23..770 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:40 Download gff for
FMO05204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Drip-RA | 571..1315 | 23..770 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:40 Download gff for
FMO05204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11412385..11412574 | 580..770 | 98 | <- | Minus |
| 2R | 11412632..11412985 | 226..579 | 100 | <- | Minus |
| 2R | 11421258..11421436 | 47..225 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:13 Download gff for
FMO05204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7308763..7308941 | 47..225 | 100 | <- | Minus |
| arm_2R | 7299890..7300079 | 580..770 | 98 | <- | Minus |
| arm_2R | 7300137..7300490 | 226..579 | 100 | <- | Minus |
