FMO05206.5prime Sequence
951 bp (778 high quality bases) assembled on 2008-08-22
> FMO05206.5prime
ATACATTATACGAAGTTATCAGTCGACATGAAGGAACAGCCGCTAAAGGA
GATCACACAGCTCATCCACGCCATCAAAGTGGGGCTGGTGGAGGGATCCT
ACAACATAACCAACAAGACGCTGGACATCTTCAAGTACATCATCATGAGC
AAGAGCTGGCAGAACGCCGATGCTCTCATGCAGATTGTGCGCGACCAGTG
TAAGATCCTGCAGGCAGCTCTGCCCCAGGAGACGGTTACCTCGAACATTG
CCAGGCGGATCCTCAAGCTGACTCGCGAGGAGTTCGATCTGTTGCACGCC
AAGGTGCAACACTTCGCGGACGACTCACAGGCCTCGCTGTCGCTTCACAA
GCTAGTCACGCAGACCAGCGAGAGCAACGTCAGCGTAGATTACTCGGTGC
CCCAGCATGGATTGCGGGAAGCGCTGCTCGACCACCTGCAGGAGGTGGAA
ACGGAGCTGGAGACCAGTTCGGAGAACATCTGCGTCCAGGCCGAGGAGCA
CATCCATTCGTCGGAGATCATCTTGACACTGGGACACTCGCGCAGCGTCG
AGAATTTCCTCAAAAGGGCGATCAAAAAGCGTCAGTTTCTCACCATCATC
GTAGCCGAATGTGCGCCAGCCTGCCGGGGTCACAATTTGGCCGCCAGCTT
GGGCCAACGAGAATAAATGTGGAGATTGTTGTGATCCCCAGATGCGGCCA
TCTTCGCTATGATGTCGCGCGTCAACATGTAATAATCGGTACGCACAGCG
TGCTGGCTAATGGAGGACTCAGAGCGGCGTGTGTAGCGTTTACAGTGGCC
CTGGCCGCCAAGCATTAACTCTGTGCCTGTCATGTACTGGCGCCCATGTA
CAACTCTGACCATTGCATCTGCGGCGAGCAGGACGTCCTTCATATGTCCG
GCTGTGCGGAGGATGTGAAACCCTACGATTCCATTCCACGCGCTGAAGCC
A
FMO05206.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF2B-beta-RA | 1357 | CG2677-RA | 148..1069 | 28..951 | 4165 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2704993..2705450 | 171..628 | 2290 | 100 | Plus |
| X | 23542271 | X | 2705539..2705848 | 627..938 | 935 | 92.4 | Plus |
| X | 23542271 | X | 2704836..2704923 | 83..170 | 440 | 100 | Plus |
| X | 23542271 | X | 2704718..2704774 | 28..84 | 285 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:20:02 has no hits.
FMO05206.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:13 Download gff for
FMO05206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF2B-beta-RA | 148..1068 | 28..950 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:15:07 Download gff for
FMO05206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF2B-beta-RA | 143..1063 | 28..950 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:00 Download gff for
FMO05206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF2B-beta-RA | 148..1068 | 28..950 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:00 Download gff for
FMO05206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2704718..2704773 | 28..83 | 100 | -> | Plus |
| X | 2704837..2704923 | 84..170 | 100 | -> | Plus |
| X | 2704993..2705449 | 171..627 | 100 | -> | Plus |
| X | 2705540..2705860 | 628..950 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:13 Download gff for
FMO05206.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2598751..2598806 | 28..83 | 100 | -> | Plus |
| arm_X | 2598870..2598956 | 84..170 | 100 | -> | Plus |
| arm_X | 2599026..2599482 | 171..627 | 100 | -> | Plus |
| arm_X | 2599573..2599893 | 628..950 | 92 | | Plus |
