FMO05207.5prime Sequence
281 bp (281 high quality bases) assembled on 2008-08-22
> FMO05207.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGAAGGCCCAT
CCCCCAGAGGTGAAAAAATACATGGACAAGCGCATGATGCTGAAACTGAA
CGGCGGACGCGCGGTGACCGGTATTTTGCGAGGCTTCGATCCCTTCATGA
ACGTGGTCCTGGACGACACGGTGGAGGAGTGCAAGGACAACACGAAGAAC
AACATCGGCATGGTGGTTATCCGCGGCAACAGCATCGTCATGGTGGAGGC
CCTGGACAGGGTCGCAAGCTTTCTAGACCAT
FMO05207.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:15:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SmG-RB | 432 | CG9742-RB | 83..310 | 36..263 | 1140 | 100 | Plus |
| SmG-RA | 483 | CG9742-RA | 83..310 | 36..263 | 1140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:15:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16640091..16640240 | 217..68 | 750 | 100 | Minus |
| X | 23542271 | X | 16639983..16640031 | 263..215 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:15:48 has no hits.
FMO05207.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:05 Download gff for
FMO05207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SmG-RA | 76..314 | 28..269 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:15:08 Download gff for
FMO05207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SmG-RA | 70..308 | 28..269 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:31 Download gff for
FMO05207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SmG-RA | 76..314 | 28..269 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:31 Download gff for
FMO05207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16639979..16640030 | 216..269 | 94 | <- | Minus |
| X | 16640093..16640240 | 68..215 | 100 | <- | Minus |
| X | 16640306..16640338 | 34..67 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:05 Download gff for
FMO05207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16534012..16534063 | 216..269 | 94 | <- | Minus |
| arm_X | 16534126..16534273 | 68..215 | 100 | <- | Minus |
| arm_X | 16534339..16534371 | 34..67 | 97 | <- | Minus |
