FMO05208.5prime Sequence
459 bp (459 high quality bases) assembled on 2008-08-22
> FMO05208.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCGTTGCTACAA
GCGCGTAGACTCCCCGCCGCCCTACTCGGATCCATTCGCCACCGCTCCTC
CAGCGGAGGACGTCATGCAGCAGAACCTGGCGTCGCCCGCACATCCCAAT
CCGGTGATACCCGTGATGGCCCAAACCATGCCGGTGTTGCAGCCCGTAAG
CGTGATGCATCACCAGACGACAGTGCTGGTGGACAATACCCGCCAGGGAA
CGATCTGTCCCCACTGCAACGCTCGGATTCGCCTTCGCGTGGAGCACCAT
CCTACCGGATCAACTTACTGTATGGCGGCGTTGCTCTGCCTATTCCTATG
CTGGCCCTGCGTCTGCGCCCCTTGCTGCTGCAACTGTTGCTACAAGACCT
CCCAGTACTGTCCCAACTGCAACTCCTGCTTGGGTTCGTTTGCAAGCTTT
CTAGACCAT
FMO05208.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42565-RB | 2577 | CG42565-RB | 1945..2350 | 36..441 | 2030 | 100 | Plus |
CG42565-RA | 700 | CG42565-RA | 68..473 | 36..441 | 2030 | 100 | Plus |
CG13511-RB | 2577 | CG13511-RB | 1945..2350 | 36..441 | 2030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22660550..22660861 | 36..347 | 1560 | 100 | Plus |
2R | 25286936 | 2R | 22661069..22661162 | 348..441 | 470 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:54:03 has no hits.
FMO05208.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:31 Download gff for
FMO05208.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42565-RA | 68..478 | 36..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:15:10 Download gff for
FMO05208.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13512-RA | 68..478 | 36..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:43 Download gff for
FMO05208.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13511-RB | 1945..2355 | 36..446 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:43 Download gff for
FMO05208.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22660550..22660861 | 36..347 | 100 | -> | Plus |
2R | 22661069..22661167 | 348..446 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:31 Download gff for
FMO05208.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18548055..18548366 | 36..347 | 100 | -> | Plus |
arm_2R | 18548574..18548672 | 348..446 | 98 | | Plus |