FMO05209.5prime Sequence
419 bp (419 high quality bases) assembled on 2008-08-22
> FMO05209.5prime
GCATACCTTATACGAAGTTATCAGTCGACATGTTCAAATTTGTTGCTGTC
ATCGCTCTCCTGGTCGCCACCGCCAGTGCTGGTCTCATCGAGACTCACCA
TGTGGTGCACGAGCCCGTTCTGGCCAAGGTTGGATCGGTGGTGCACTCTG
CTCCCTCGGCGGTTTCCCACCAGAGCATCACCCAGGTGCACAGCAAGGCG
GTGGTGCAGCCAGTGGTTGCTCCCATCGTGAAGACCACCACCTACTCCCA
TCCCGCCGTTGCCGTCCACGCTGCTCCAGTGGTTCACTCCGTGCCCGTTG
TCCACGCCGCTCCAGTCGTCCACTCTGTGCCTCTGGTCCACTCAGCTCCC
CTCGTCAAGTCGGTGGTGCACTCCGCTCCCCTGGCCTACACCCTGCACCA
CGCAAGCTTTCTAGACCAT
FMO05209.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13041-RA | 513 | CG13041-RA | 68..439 | 30..401 | 1860 | 100 | Plus |
CG13060-RA | 539 | CG13060-RA | 71..473 | 30..411 | 1435 | 91.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:18:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16319028..16319387 | 401..42 | 1800 | 100 | Minus |
3L | 28110227 | 3L | 16320004..16320281 | 48..325 | 1345 | 98.9 | Plus |
3L | 28110227 | 3L | 16320316..16320388 | 339..411 | 275 | 91.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:18:07 has no hits.
FMO05209.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:36 Download gff for
FMO05209.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13041-RA | 63..443 | 25..406 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:15:12 Download gff for
FMO05209.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13041-RA | 57..437 | 25..406 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:58 Download gff for
FMO05209.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13041-RA | 63..443 | 25..406 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:58 Download gff for
FMO05209.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16319024..16319387 | 42..406 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:36 Download gff for
FMO05209.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16312124..16312487 | 42..406 | 99 | <- | Minus |