FMO05214.5prime Sequence
1000 bp (1000 high quality bases) assembled on 2008-08-22
> FMO05214.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGCAGCCAAA
AGATTGGGATCGTGGGCAGTGGACTGATCGGCAGGGCGTGGGCGATGCTC
TTTGCAGCAGCTGGCTATCGTGTCCAACTGTATGACATCCTGGAGAGCCA
GTTGGCCACTGCGCTGCAGGAGCTGGACAAGGATTTGCATCGGCTGGAGG
AGCAGAGCGCGTTGCGTGGCAATATACGGGCCTCGGAACAGTTTGCCCTG
ATCGGGGTCACCACTCGACTAGAGGAACTCACCAGGGAGGCGGTGCACAT
ACAGGAGTGTGTTCCCGAAGTTTTGCATCTGAAGAAGAGTCTGTACTCGC
AGTTGGATGAGCTGCTCGAGGAGCAGACAGTGGTGGCCAGTTCCACGAGC
ACCTTTATGCCATCGCTGTACAGCGAGGGTCTGCAAAAGAGACAACAGAT
GCTAGTGGCTCATCCACTGAACCCGCCGTATTTTATACCCCTGGTAGAGA
TTGTCCCAGCTCCCTGGACATCCCCGAGTGCGGTGGAGCGAACCCGTGAC
CTAATGCTCAGCCTGGGCCAACGTCCGGTAACTTTAAAAAGAGAGATTCA
GGGCTTCGCCACCAATCGGATTCAGTATGCCATTCTGAACGAGGTGTGGC
GCCTGGTGGGCTCCGGTATCCTCAGCGTGGCCGATGTGGATCGAGTTCTC
AGCCAGGGCTTGGGATTGCGATATGCCCTGCTAGGATCCCTGGAGACAGC
CCATCTGAATGCGCCTGGTGGTGTGGCTGACTACTTCCAGCGTTTTGGTG
GGGAAATCTCTGCGGTGAGTGCCACCTATGGAGAGACCCCGAATACCCAG
GAGGATCGGGAAACGCTGGCCGAGATTGCACGGCAGTGTGAGCAGCTGGT
GTCCCTGGAAAAACTCGACGAGAGGCGGGCCGTTCGTGATGAATTCCTCA
TCCAACTGGGCAAACTTGAAGAAGCAGTTTGAAGCAAGCTTTCTAGACAT
FMO05214.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10131-RA | 1058 | CG10131-RA | 7..956 | 33..983 | 4685 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14630383..14630921 | 444..983 | 2620 | 99.4 | Plus |
| 2R | 25286936 | 2R | 14629916..14630331 | 33..448 | 2065 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:28:42 has no hits.
FMO05214.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:10 Download gff for
FMO05214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10131-RA | 2..956 | 28..983 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:15:18 Download gff for
FMO05214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10131-RA | 1..953 | 31..983 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:47 Download gff for
FMO05214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10131-RA | 2..956 | 28..983 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:47 Download gff for
FMO05214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14629911..14630331 | 28..448 | 99 | -> | Plus |
| 2R | 14630388..14630921 | 449..983 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:10 Download gff for
FMO05214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10517416..10517836 | 28..448 | 99 | -> | Plus |
| arm_2R | 10517893..10518426 | 449..983 | 99 | | Plus |
