Clone FMO05219 Report

Search the DGRC for FMO05219

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:52
Well:19
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05219.5prime Sequence

403 bp (403 high quality bases) assembled on 2008-08-22

> FMO05219.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCAGCACAAGT
CGAGACCAGGAAGACTCTTAGTCACACGGAAGGAGCATCAGAAAATAGCA
GTTGAAAAGTTTAGTTTAAGTGTAAGAGCAACAACAACAACAATAACAAG
AACAAGAACCACATCGACAACGACAGGCAGCAGAACTTGGCTTAAATGCG
CTCATGTGCAAAAATGCCATTGTTTTGGATTTGGTCGTAAACAAAGCGGT
GAAGTGAAGGCAAAAAATTTCCTTTTTCCTTTCCACACCCCCCAAGAAGC
AAAGAAAAACTTGGAAAGGTTGGCACATTTTCCACCTCTCCCGGTCGAAG
TTGGGGGCGAAAAAAAGAAAACGGAAGGCACTGGCGCAAGCTTTCTAGAC
CAT

FMO05219.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:59:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17836945..17837292 38..385 1740 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:59:34 has no hits.

FMO05219.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:15:25 Download gff for FMO05219.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31246-RA 1143..1490 38..385 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:01 Download gff for FMO05219.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 17836945..17837292 38..385 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:01 Download gff for FMO05219.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 17836945..17837292 38..385 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:35 Download gff for FMO05219.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13662667..13663014 38..385 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:35 Download gff for FMO05219.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13662667..13663014 38..385 100   Plus