FMO05228.5prime Sequence
566 bp (566 high quality bases) assembled on 2008-08-22
> FMO05228.5prime
CTTATACGAAGTTATCAGTCGACATGAAGCCATCCACTCCAGTCGCAGCC
ATTCCGCTAATGACGATAGTGGTCGCTGTCCTGCTGCAGACGCACTGCGT
CCGTGGCCAGACCCAGGCTTTCGATCTCGCCAAGCTGCTGCCCAAGACCG
GAACGGAGCCCATCTGGGCGGTAATCGATCGCAACTTGCCGCAGGTGCAG
GAGCTGGTCACCGCGGCCAGGATGGAGTGCATCCAGAAGCTGCAGCTGCC
CAGGGACCAGCGACCGCTGGGGAAGGTGACCAATCCAAGTGAGAAGGAGA
AGTGCCTGGTGGAGTGCGTGCTCAAGAAGATCAAGTTGATGGACGCCGAC
AACAAGCTGAACGTTGGCCAGGTGGAGAAGCTGACCAGCCTGGTGACCCA
GGACAACAAGATGGCCATCGCCGTTAGCTCCAGCATGGCGCAGGCCTGCA
GCCGCGGCATCTCCTCGAAGAACCCCTGCGAGGTGGCCCACCTCTTCAAC
CAGTGCATCAGTCGCCAGCTGGAGCGCAACAACGTAAAGCTGGTCTGGGC
AAGCTTTCTAGACCAT
FMO05228.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp19c-RC | 789 | CG15457-RC | 11..535 | 24..548 | 2625 | 100 | Plus |
| Obp19c-RA | 978 | CG15457-RA | 200..724 | 24..548 | 2625 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20418451..20418765 | 338..24 | 1575 | 100 | Minus |
| X | 23542271 | X | 20418175..20418385 | 548..338 | 1055 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:46:30 has no hits.
FMO05228.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:09 Download gff for
FMO05228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp19c-RA | 200..724 | 24..548 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:15:41 Download gff for
FMO05228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp19c-RA | 200..724 | 24..548 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:58 Download gff for
FMO05228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp19c-RA | 200..724 | 24..548 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:58 Download gff for
FMO05228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20418175..20418384 | 339..548 | 100 | <- | Minus |
| X | 20418451..20418765 | 24..338 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:09 Download gff for
FMO05228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20289202..20289411 | 339..548 | 100 | <- | Minus |
| arm_X | 20289478..20289792 | 24..338 | 100 | | Minus |
