FMO05232.5prime Sequence
1006 bp (931 high quality bases) assembled on 2008-08-22
> FMO05232.5prime
CATACATTATACGAAGTTATCAGTCGACATGGACATCCTTTTGGCCAACG
TAAGTGGGCTGCAGTTCAAGGCGGAGCGGGACCTCATCGAGCAGGTGGGT
GCCATCCCGCTGCCGTTCTACGGCATGGACAAGTCCATTGCGGCGGTCTG
CAACTTCATCACCAGGAACGGACAGGAGTGCGACAAAGGGAGCGCCTGTC
CCTTCCGACACATTCGCGGGGACCGGACGATCGTGTGCAAGCACTGGCTG
AGAGGACTGTGCAAGAAGGGCGACCAGTGCGAGTTCCTGCACGAGTACGA
CATGACCAAGATGCCCGAGTGCTACTTCTACTCGAGGTTCAACGCCTGCC
ACAACAAAGAGTGTCCCTTTTTGCACATCGACCCGCAGAGCAAGGTGAAG
GATTGTCCGTGGTACAAGAGAGGCTTCTGCCGCCACGGTCCCCACTGCCG
GCACCAGCATCTGCGCCGTGTCCTGTGCATGGACTACCTAGCCGGCTTCT
GCCCCGAGGGCCCGTCCTGCAAGCACATGCATCCGCACTTCGAGCTGCCC
CCGCTGGCGGAACTGGGTAAGGATCAGCTGCACAAGAAACTGCCCACGTG
CCACTATTGCGGCGAGCTGGGCCACAAGGCCAACTCGTGCAAGCAGTATG
TGGGCAGCCTGGAGCATCGCAACAATATCAACGCAATGGATCACTCCGGC
GGACACTCGGGCGGCTACTCTGGACACTCCGGCCACATCGAGGGTGCCGA
TGACATGCAAATCCAATCACCACAGTCAGCCGCATGGTCCCCGGCTTCGT
CAAGGTGCCCACGCCCCTGGAGGAGATCACCTGCTACAAGTGCGGGAACA
ATGGCCACTACGCCGAACAAGTGTCCCAAGGGTCACCTCGCCTTCCTCTC
TAATCAACATAGTCATAATGGCAAGCTTTCTAAACCATTCGTTTGGGCGC
GCCGGGCCAGGTAAGTGGTCATTATCATAATCCATTAATCATAATTCATA
AATCAC
FMO05232.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Clp-RA | 1246 | CG3642-RA | 116..1002 | 29..918 | 4345 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 820079..820965 | 29..918 | 4270 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:53:50 has no hits.
FMO05232.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:22 Download gff for
FMO05232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Clp-RA | 105..1012 | 19..927 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:13:59 Download gff for
FMO05232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Clp-RA | 105..1012 | 19..927 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:35 Download gff for
FMO05232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Clp-RA | 105..1012 | 19..927 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:35 Download gff for
FMO05232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 820068..820975 | 19..927 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:22 Download gff for
FMO05232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 820068..820975 | 19..927 | 98 | | Plus |
