FMO05236.5prime Sequence
495 bp (151 high quality bases) assembled on 2008-08-22
> FMO05236.5prime
AGAAACGGGTGTCCTTTTCGAGGACGATGCGCAAACAGTCGACGGTGACC
TGACCACCGACAGATTCCAGATGAAACGAGCTGAGAAGCGTCGGCTACCC
CTAGTCTGGCGGAATATAATCCTGTTCGCATTGGTCCACCTGGCTGCTCT
ATATGGCCTGCACTCCATATTCACAAGGGCGAAACTGGCAACCTCACTTT
TCGCTGCCGGATTGTATATCATTGGCATGCTGGGCGTTACAGCCGGTGCC
CATCGTCTTTGGGCGCTTCGCACCTACAAGGCCAAGTGGCCCCTGCACCT
GCTCCTGGTCATCTTCATACTATCGCCTTTCAGGATGCCGTCTACCATTG
GCCCCGTGACCATCACGTCCACCACAAATACTCGGAATCTGATGCATATC
CTCACAACGCCACCAGGGTATTTTTCTTCTCGCATGTGGGCTGGCTGCTC
TGCAAAAAGCATCCGGATATAAGGAAAAGGGAAGGGGATTGGATC
FMO05236.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:50:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Desat2-RA | 1357 | CG5925-RA | 218..714 | 1..495 | 2255 | 97.2 | Plus |
| Desat1-RD | 1934 | CG5887-RD | 447..682 | 233..467 | 615 | 84.8 | Plus |
| Desat1-RB | 1978 | CG5887-RB | 491..726 | 233..467 | 615 | 84.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:50:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12436733..12437027 | 203..495 | 1225 | 95.9 | Plus |
| 3R | 32079331 | 3R | 12436465..12436667 | 1..203 | 985 | 99 | Plus |
| 3R | 32079331 | 3R | 12446007..12446242 | 233..467 | 590 | 84.3 | Plus |
| 3L | 28110227 | 3L | 11023884..11023954 | 325..395 | 205 | 85.9 | Plus |
| 3R | 32079331 | 3R | 30186709..30186831 | 446..324 | 195 | 77.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:50:36 has no hits.
FMO05236.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:30 Download gff for
FMO05236.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| desat2-RA | 218..714 | 1..495 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:15:34 Download gff for
FMO05236.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| desat2-RA | 218..714 | 1..495 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:39 Download gff for
FMO05236.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Desat2-RA | 218..714 | 1..495 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:39 Download gff for
FMO05236.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12436465..12436667 | 1..203 | 99 | -> | Plus |
| 3R | 12436734..12437027 | 204..495 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:30 Download gff for
FMO05236.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8262187..8262389 | 1..203 | 99 | -> | Plus |
| arm_3R | 8262456..8262749 | 204..495 | 95 | | Plus |
