FMO05239.5prime Sequence
847 bp (847 high quality bases) assembled on 2008-08-22
> FMO05239.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAACCAGATTT
TATTATGCTCTCCAATTTTACTGCTGCTTTTTACAGTGGCAAGCTGCGAT
AGTGAGCAACAACTCGATTCAGCTATGCACCTGAAAAGTGATTCTACGAA
AAGTGCATCTCTGAAAAATGTTGCTCCCAAGAATGATGAGACACAGGCCA
AAATAGCCAAAGATGATGTAGCTCTGAAAGATGCGAAAAAGGGCGATTAT
ATAATGGATATCGATATTTCTGATTTGCCGCTGGATGATTATCCAATCAA
TAGGTCCAAATCACTAAAAAGCTCTTCCATTGACTTGAATAATATTCCTT
TCAATAAAGGACTAGATGATTTCCCGGCAAAAGAAAAAAATCAAGGATCC
AATCAAAGTGCGCTCAAGGCCCTGCAACAGAGGTTACTAACGGAGCAGAA
CAATAGTTTACTTCTCCGGAACCATTCCATATACTTGATGAAAGAAATAG
AGGCCAGAAAAACGGATATTATCAAAGTACGACAGTTAAACCTCGATTTA
GAGCTCGAGCTAAATACTGTGAACCGCAGACTTTTGGAATTGAATGGGCA
ACTGCAAAACACTCGAAAGTCCACAAAGCCGTGTAAGAAACGTTCTAGTA
AGGATAGCGCCCCACCTGCCGCCAATCAGTTTCAGGAAGCCAACGTCAGG
AACACTTACCGTAACAAATATCTAACACTTCTGAAAGAACTTAGTCAGAA
GATCAATAACGAAATCGCGAAAGTCGCTACCGATGTACCCACGGAGACAA
ATCCTTCCCAAGGGAATCTACCAACACTTGCAAGCTTTCTAGACCAT
FMO05239.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp26Aa-RA | 958 | CG8982-RA | 21..817 | 33..829 | 3970 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5893024..5893786 | 829..67 | 3800 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:59:24 has no hits.
FMO05239.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:29 Download gff for
FMO05239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp26Aa-RA | 18..825 | 29..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:09 Download gff for
FMO05239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp26Aa-RA | 18..825 | 29..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:58 Download gff for
FMO05239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp26Aa-RA | 18..825 | 29..837 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:58 Download gff for
FMO05239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5893019..5893781 | 72..834 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:29 Download gff for
FMO05239.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5893019..5893781 | 72..834 | 99 | <- | Minus |
