FMO05241.5prime Sequence
612 bp (612 high quality bases) assembled on 2008-08-22
> FMO05241.5prime
TCGTATAGCATACCTTATACGAAGTTATCAGTCGACATGCTGAAGCTTAC
GGTTCTACTAATTACATTGCTGGTCATAGCAAAAACTGGATGGACTCGCG
AAAAGTTCTCCATACAAGTAAACGAAGGAAATACGTTTGGTGCGCTCGTC
AAGGCGGAACCCTTTACCAAAATCAACGACGGATACTACTTCTTTGGCAC
GGAGTCCTTGAACTGGTACGAGGCCTACGAGAAATGCCGCGAATTGAACT
CTGAGCTGGTCACATTCGAAACGGACCAGGAGTTCGATGCCGTTACGGCT
TTCCTGACGGCCAACGGATCACGGCTGACGTACTGGACATCGGGAAACGA
TCTGGCCAAGACTGGCAGCCACAGATGGTTCACCAATGCCCAGCGAATTA
GTTCGCTCAGGTGGGCAAGGAATCAACCGGATAATGCTGGGCAGAAGGAG
CACTGCATCCACCTTGGCTATATTTACAAGGACTCGCGGAAGTTTGAGCT
AAACGATAGACCCTGCTCACAGGATCCAAACAGTTTGTTTAAGTATATAT
GCGAAGCTCCCGAAATGGAAACCATTTCCATTGTGGTGTGGAAGGCAAGC
TTTCTAGACCAT
FMO05241.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lectin-galC1-RB | 702 | CG9976-RB | 14..571 | 37..594 | 2775 | 99.8 | Plus |
| Lectin-galC1-RA | 759 | CG9976-RA | 14..571 | 37..594 | 2775 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19417618..19418086 | 126..594 | 2330 | 99.8 | Plus |
| 2L | 23513712 | 2L | 19417460..19417555 | 37..132 | 465 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:14:53 has no hits.
FMO05241.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:31 Download gff for
FMO05241.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lectin-galC1-RA | 7..571 | 29..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:12 Download gff for
FMO05241.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lectin-galC1-RA | 7..571 | 29..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:50 Download gff for
FMO05241.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lectin-galC1-RA | 7..571 | 29..594 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:50 Download gff for
FMO05241.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19417453..19417550 | 29..127 | 96 | -> | Plus |
| 2L | 19417620..19418086 | 128..594 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:31 Download gff for
FMO05241.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19417453..19417550 | 29..127 | 96 | -> | Plus |
| arm_2L | 19417620..19418086 | 128..594 | 99 | | Plus |
