FMO05246.5prime Sequence
360 bp (360 high quality bases) assembled on 2008-08-22
> FMO05246.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCGGGATCTGG
AGTTGCCAAGCAGATATTTGCCCTCGATTTCGAGATCTTTGGACGAGTGC
AAGGTGTGTTCTTCCGCAAACACACGTCGCATGAGGCTAAAAGATTGGGA
GTTAGGGGCTGGTGCATGAATACCCGGGATGGGACCGTCAAGGGACAACT
GGAGGCTCCTATGATGAATTTAATGGAAATGAAACATTGGCTGGAGAACA
ACCGAATTCCCAACGCTAAGGTCTCAAAGGCTGAATTTTCGCAAATCCAG
GAAATCGAGGACTATACGTTCACTTCCTTTGACATAAAACATGCAAGCTT
TCTAGACCAT
FMO05246.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acyp2-RB | 619 | CG18505-RB | 148..453 | 37..342 | 1530 | 100 | Plus |
Acyp2-RA | 543 | CG18505-RA | 148..453 | 37..342 | 1530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15793210..15793321 | 231..342 | 560 | 100 | Plus |
3R | 32079331 | 3R | 15793042..15793152 | 121..231 | 555 | 100 | Plus |
3R | 32079331 | 3R | 15792835..15792903 | 37..105 | 345 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:24:30 has no hits.
FMO05246.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:49 Download gff for
FMO05246.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acyp2-RA | 144..456 | 29..346 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:03 Download gff for
FMO05246.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acyp2-RA | 93..405 | 29..346 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:13 Download gff for
FMO05246.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acyp2-RA | 144..456 | 29..346 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:13 Download gff for
FMO05246.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15792831..15792901 | 29..103 | 94 | -> | Plus |
3R | 15792957..15792973 | 104..120 | 100 | -> | Plus |
3R | 15793042..15793151 | 121..230 | 100 | -> | Plus |
3R | 15793210..15793324 | 231..346 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:49 Download gff for
FMO05246.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11618553..11618623 | 29..103 | 94 | -> | Plus |
arm_3R | 11618679..11618695 | 104..120 | 100 | -> | Plus |
arm_3R | 11618764..11618873 | 121..230 | 100 | -> | Plus |
arm_3R | 11618932..11619046 | 231..346 | 98 | | Plus |