FMO05247.5prime Sequence
411 bp (411 high quality bases) assembled on 2008-08-22
> FMO05247.5prime
AGCATACATTATACGAAGTTATCAGTCGACATGCATTTGATTAAGATCGC
CTTGTTACTAAGCTTTTTGGCTTTATGCCAAAAGTCGCAAGTTCAAGCCG
CCATAAGTTCGGAACTCGATCACTATCTGCGATGTTTGGAAGTGGTGACT
GATGCCGGTGCCCTAATGATCGAGAACTCTATAACGGCCATAAGCCTCCT
ATCCGATTGCGTTGATTTTCAGCCGAAAATCAAACTAACTGGTAGCATTC
TCAGATTTATTAGGGTGGCCCATCAGTTTGGCAAGAAGGCGATATACGAT
CGACCGGAATGTCTCGTACAAACCTTTACCACCGGAGTCGGACTGATTAG
ACCGATTATAGCCAAGTTTGATAGCTTGAGGTGCTTTGATGAGGCAAGCT
TTCTAGACCAT
FMO05247.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp53C14a-RB | 705 | CG8626-RB | 44..406 | 31..393 | 1815 | 100 | Plus |
| Acp53C14a-RA | 479 | CG8626-RA | 44..406 | 31..393 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16748133..16748453 | 393..73 | 1605 | 100 | Minus |
| 2R | 25286936 | 2R | 16748506..16748547 | 72..31 | 210 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:14:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib3 | 2883 | transib3 TRANSIB3 2883bp | 24..52 | 83..55 | 109 | 86.2 | Minus |
FMO05247.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:28 Download gff for
FMO05247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14a-RA | 26..392 | 31..398 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:05 Download gff for
FMO05247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14a-RA | 15..381 | 31..398 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:47 Download gff for
FMO05247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14a-RA | 44..410 | 31..398 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:47 Download gff for
FMO05247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16748129..16748453 | 73..398 | 99 | <- | Minus |
| 2R | 16748506..16748547 | 31..72 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:28 Download gff for
FMO05247.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12635634..12635958 | 73..398 | 99 | <- | Minus |
| arm_2R | 12636011..12636052 | 31..72 | 100 | | Minus |
