FMO05249.5prime Sequence
506 bp (506 high quality bases) assembled on 2008-08-22
> FMO05249.5prime
ATACGAAGTTATCAGTCGACATGCCCACGGAAATCGAGAACATCAACCCC
AATGTCTACGACAGAATCAAGGAAAGGGTATTAACCGCCAACGAAGAAGA
CGAAAACGTGCCCGATCCATTTGACAAACGAGAGATTTTCGATCTCATCA
GAAATATTAATGACCCGGAACATCCTTTGACCCTGGAGGAGCTGCATGTG
GTGCAGGAAGATCTAATCCGGATAAACGATAGCCAGAATTCCGTGCACAT
CAGCTTCACCCCGACGATTCCCCATTGCTCGATGGCCACTTTGATTGGCC
TCTCCATCCGGGTGAAGTTGCTCCGCTCGCTGCCACCTCGCTTTAAGGTC
ACCGTGGAAATAACGCCCGGCACCCACGCCTCCGAGCTGGCGGTGAACAA
GCAGCTGGCAGACAAGGAACGAGTGGCCGCCGCCCTGGAGAACAATCACC
TCGCCGAGGTGATCAACCAGTGCATCGCCGCCAAGGGTGCAAGCTTTCTA
GACCAT
FMO05249.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7949-RA | 629 | CG7949-RA | 74..541 | 21..488 | 2340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10883138..10883485 | 141..488 | 1740 | 100 | Plus |
| 3L | 28110227 | 3L | 10882963..10883083 | 21..141 | 605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:19:39 has no hits.
FMO05249.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:06 Download gff for
FMO05249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7949-RA | 65..546 | 13..495 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:22 Download gff for
FMO05249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7949-RA | 1..471 | 21..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:50 Download gff for
FMO05249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7949-RA | 65..546 | 13..495 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:50 Download gff for
FMO05249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10882954..10883083 | 13..141 | 96 | -> | Plus |
| 3L | 10883139..10883490 | 142..495 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:06 Download gff for
FMO05249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10876054..10876183 | 13..141 | 96 | -> | Plus |
| arm_3L | 10876239..10876590 | 142..495 | 99 | | Plus |
