Clone FMO05255 Report

Search the DGRC for FMO05255

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:52
Well:55
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13482-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05255.5prime Sequence

357 bp (357 high quality bases) assembled on 2008-08-22

> FMO05255.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGTCGCCGCCACATCA
CGAAAATCGCCTGTTTGGAATCCACCTTGGCCTGAATTTGGGTGGAGGTG
GACATCATCACCACCACCATCATCCACCGCCTCCGGTGCACCACTATCAC
CCACCGCCTCCGGTGCACCACCATCACCACCACGGACCTCCAATGCACCA
CCACGGACCCCCGCCGCACCACCACCACCACTACGGACCTCCGCCACCGC
CGCCCCACTACGATCATCATCATCATCACCACGGCAGCCACTTTGACCAT
CATCATGGTCCTCACCATGGACATCATCATCATCACTGCGCAAGCTTTCT
AGACCAT

FMO05255.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG13482-RA 540 CG13482-RA 92..397 34..339 1530 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14329437..14329742 34..339 1530 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:43:30 has no hits.

FMO05255.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:08 Download gff for FMO05255.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13482-RA 84..397 26..339 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:31 Download gff for FMO05255.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13482-RA 1..309 34..340 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:35 Download gff for FMO05255.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13482-RA 84..397 26..339 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:35 Download gff for FMO05255.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 14329432..14329742 29..339 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:08 Download gff for FMO05255.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14322532..14322842 29..339 99   Plus