FMO05258.5prime Sequence
456 bp (456 high quality bases) assembled on 2008-08-22
> FMO05258.5prime
TCGTATAGCATACCTTATACGAAGTTATCAGTCGACATGTGCATGCCGTA
TTTGAGTAAGCTCTTCGGTGGAGGCGATCGCCGGCAGCGTCGCACCCGCG
ATGGAGGCGTCACCCCACTGCCCAGCCTGGCCAATGTGACCCAGGTCTCC
ATGGACACCGTCAAGTCCGCCAAGTCAGCGAAGTCAGCGAAGTCGGCTAA
ATCCGGCAAGTCCGCCGGTCGCCGTAGTACCACCGCTGCCAATCCTCCTG
AGTCCAGTGTCAGCAGCAATGAGGATAATGCGGAGCAACCTCTGGCGACC
GCCTCCCGAGGAGCTGTGCGCAACGCCACCGCCTCGATGGCCACCAGTGC
TGCTCCAGCCGACGAGGCGAGGTCGCGCCGCTCCTGGTGGGGATACTTTG
GCATGAGCAAGAACAAGAAGTCCAGCATTGAGTCGCTCGCAAGCTTTCTA
GACCAT
FMO05258.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13010-RA | 681 | CG13010-RA | 103..504 | 37..438 | 2010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16678442..16678843 | 438..37 | 2010 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:43:24 has no hits.
FMO05258.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:05 Download gff for
FMO05258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13010-RA | 99..504 | 29..438 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:18 Download gff for
FMO05258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13010-RA | 1..405 | 37..439 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:31 Download gff for
FMO05258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13010-RA | 99..504 | 29..438 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:31 Download gff for
FMO05258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16678442..16678847 | 29..438 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:05 Download gff for
FMO05258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16572475..16572880 | 29..438 | 99 | | Minus |
