FMO05260.5prime Sequence
400 bp (400 high quality bases) assembled on 2008-08-22
> FMO05260.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGTCCGGAGCAGCTT
GGATGTCCCTAGCTTTTGTGGCCTGTCTGCTGGCCGCATCGGTGGACGGC
AATGGGTTCAGCACCCAGTATCGTGGTCACACGCAGCACCCTAGCCTGGC
GGAGCACTGCCTCTACGAGGAGTTGGACCTGGCCGTTCCACTCAATGGCT
ACGTTCTGCCCTCCGGTCAGCAGGGCTACTGCATTCGCTTGGAGTGCACC
GATGACTATCTGCTGTTGATACGCCACTGCGACAAACAGCCATGGCCGCG
ACCTGGCTGCCACCTCTCACCCAACGACTATGATTTCAAGTTCCCCGAGT
GCTGTCCCCAACTCGAGTGCTCCGACGAATACGCAAGCTTTCTAGACCAT
FMO05260.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15199-RB | 522 | CG15199-RB | 25..373 | 34..382 | 1745 | 100 | Plus |
| CG15199-RA | 664 | CG15199-RA | 167..515 | 34..382 | 1745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11140790..11141032 | 276..34 | 1215 | 100 | Minus |
| X | 23542271 | X | 11140623..11140728 | 382..277 | 530 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:15:01 has no hits.
FMO05260.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:38 Download gff for
FMO05260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15199-RA | 161..515 | 28..382 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:21 Download gff for
FMO05260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15199-RA | 161..515 | 28..382 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:56 Download gff for
FMO05260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15199-RA | 161..515 | 28..382 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:56 Download gff for
FMO05260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11140790..11141038 | 28..276 | 98 | | Minus |
| X | 11140623..11140728 | 277..382 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:38 Download gff for
FMO05260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11034656..11034761 | 277..382 | 100 | <- | Minus |
| arm_X | 11034823..11035071 | 28..276 | 98 | | Minus |
