Clone FMO05262 Report

Search the DGRC for FMO05262

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:52
Well:62
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG7423-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05262.5prime Sequence

426 bp (426 high quality bases) assembled on 2008-08-22

> FMO05262.5prime
TCGTATAGCATACCTTATACGAAGTTATCAGTCGACATGGGCGATGGACA
CAAAATCGAGGACATCATCTGGACAATCAAGAACGGCGTGTACGACGAGG
TGGAGCGAATTTTCCTAGCCGGATCGCTTAATGTGAACGATCAGATGGGC
GTCCGGTTCCCCTTGCACTACGCCGCCGACTTTGGCCAGCTGAAGCTGCT
GGAGTTCTTTGTGCGGATCGGCGCGGAGGTGGACAGGAAGGACAAGTACG
GCATCACACCGCTCCTGGCGGCCATATGGGAGGGGCATACACGCTGCGTC
GAGTTCCTGCTCCGGATGGGAGCCAGCCGCACGGAGCGCACGCCCGAGGG
GCAGAGCTACGCGGAGGCCGCCGAGCAGGAGGACATTAGACGGCTCCTGG
CGCGGGACGCAAGCTTTCTAGACCAT

FMO05262.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG7423-RA 682 CG7423-RA 112..483 37..408 1860 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19082808..19083179 408..37 1860 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:44:56 has no hits.

FMO05262.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:36 Download gff for FMO05262.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7423-RA 19..396 27..408 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:41 Download gff for FMO05262.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7423-RA 1..375 37..411 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:42 Download gff for FMO05262.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7423-RA 106..483 27..408 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:42 Download gff for FMO05262.5prime
Subject Subject Range Query Range Percent Splice Strand
X 19082808..19083185 27..408 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:36 Download gff for FMO05262.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 18976841..18977218 27..408 98   Minus