FMO05263.5prime Sequence
649 bp (649 high quality bases) assembled on 2008-08-22
> FMO05263.5prime
TTCGTATAGCATACCTTATACGAAGTTATCAGTCGACATGGTTAAATCCA
GTGTCATGTTCATCAAGCTATTTACCCTAATGTTGGCCGTGACTGGAGCC
TGGAGTGCCGCCCTCCCAGAAAATCAGGTGGCAACTGCGACCAGGACGAC
GACAAGTGATTTGGCAACCGCCGAGACTTCGGCCAAGTTGTTAAATCTCT
TTGGAACTGGCTCTGGGTATCCGAACTATGGCTACAACTATAATCGTCCG
AGCAACCCCTACTATCCCGGCTACAATACGAACTACTACGGCTCATCGGG
ATACTATCCCGGCTCGGGATATGGATCTACCACCTACTACCCAAACCAGG
GGAGCTACGGTTCCTCCGGCTACTACCCAACTCAAGGCTATAACTATTAT
TCCACTAGCAGTTATCCGACCACGAACATTCTGGGTAGCCAAGGAGGCGG
ATACGGCGGATATGGTGGCTACGGAGGTAATGGAGGTTTTAGGCAATACT
CAGGCTATTGGCAGCGGGATTATCAGGGTCAGCGGAATCGTGGATATGGC
TACTACGATGATACAGATCGTTTGGGCCTGCCCATCTCGAGAGATCGTTC
CTATGGTTCGAGTTCCTATCGTGGCTATAACGCAAGCTTTCTAGACCAT
FMO05263.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13285-RA | 787 | CG13285-RA | 103..696 | 38..631 | 2970 | 100 | Plus |
| CG13285-RB | 981 | CG13285-RB | 103..542 | 38..477 | 2200 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5534828..5535270 | 631..189 | 2215 | 100 | Minus |
| 3L | 28110227 | 3L | 5535437..5535543 | 188..82 | 535 | 100 | Minus |
| 3L | 28110227 | 3L | 5535613..5535657 | 82..38 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:59:27 has no hits.
FMO05263.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:31 Download gff for
FMO05263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13285-RA | 103..699 | 38..635 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:42 Download gff for
FMO05263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13285-RA | 1..597 | 38..635 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:59 Download gff for
FMO05263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13285-RA | 103..699 | 38..635 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:59 Download gff for
FMO05263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5534825..5535270 | 189..635 | 99 | <- | Minus |
| 3L | 5535437..5535542 | 83..188 | 100 | <- | Minus |
| 3L | 5535613..5535657 | 38..82 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:31 Download gff for
FMO05263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5527925..5528370 | 189..635 | 99 | <- | Minus |
| arm_3L | 5528537..5528642 | 83..188 | 100 | <- | Minus |
| arm_3L | 5528713..5528757 | 38..82 | 100 | | Minus |
