FMO05265.5prime Sequence
591 bp (591 high quality bases) assembled on 2008-08-22
> FMO05265.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCACATATCC
ATCTGCCAAATTCATGGAGTGCCTCCAATATGCAGCTTTTAAGCACCGGC
AGCAACGTCGCAAGGATCCTCAGGAAACCCCCTATGTGAACCATGTGATC
AATGTGAGCACTATTCTCTCCGTGGAGGCCTGCATCACAGATGAGGGAGT
CCTAATGGCTGCACTTCTGCACGATGTCGTGGAGGATACGGACGCATCTT
TCGAGGATGTTGAGAAACTCTTTGGACCGGATGTTTGTGGACTAGTGAGG
GAGGTGACGGACGACAAGTCCCTGGAGAAACAGGAGAGAAAACGCCTGCA
AATAGAAAATGCAGCCAAAAGCAGCTGCAGAGCAAAGCTCATAAAGCTGG
CTGACAAATTGGATAACCTAAGGGATCTGCAAGTCAACACACCGACAGGG
TGGACACAGGAGCGTCGTGATCAGTACTTCGTTTGGGCCAAAAAGGTGGT
GGACAATCTGCGAGGAACCAACGCCAACCTGGAGCTCAAGCTGGACGAGA
TCTTCCGCCAACGCGGCCTTTTGGCAAGCTTTCTAGACCAT
FMO05265.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mesh1-RA | 642 | CG11900-RA | 67..603 | 37..573 | 2685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29201969..29202318 | 460..111 | 1750 | 100 | Minus |
| 3R | 32079331 | 3R | 29201795..29201911 | 573..457 | 585 | 100 | Minus |
| 3R | 32079331 | 3R | 29202381..29202459 | 115..37 | 395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:35:22 has no hits.
FMO05265.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:17 Download gff for
FMO05265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mesh1-RA | 62..606 | 29..577 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:45 Download gff for
FMO05265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11900-RA | 62..606 | 29..577 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:27 Download gff for
FMO05265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mesh1-RA | 62..606 | 29..577 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:27 Download gff for
FMO05265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29201791..29201908 | 460..577 | 98 | <- | Minus |
| 3R | 29201970..29202314 | 115..459 | 100 | <- | Minus |
| 3R | 29202382..29202464 | 29..114 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:17 Download gff for
FMO05265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25027513..25027630 | 460..577 | 98 | <- | Minus |
| arm_3R | 25027692..25028036 | 115..459 | 100 | <- | Minus |
| arm_3R | 25028104..25028186 | 29..114 | 95 | | Minus |
