Clone FMO05266 Report

Search the DGRC for FMO05266

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:52
Well:66
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05266.5prime Sequence

649 bp (649 high quality bases) assembled on 2008-08-22

> FMO05266.5prime
TAGCATACATTATACGAAGTTATCAGTCGACATGCTCGTCCCAAAAATTT
CACTCGCAGCTCTGGTGAAATGTTGCAGGTCCAGTGGCAATCTTCGCAGT
CTTCATTTGGGCTATGCCTGCATACAGAAGAATTTGAGCCACATAGTGCC
GCATTGCAAGAACTTGAAGGTGCTCAAGTTTGGCATGCCCGCGAATTCTT
CAGAATACGTGCAGCTGGCTAGGCTGCCGAAGCTGGGGGAACTATCCTAC
TTTGGCATTCGCAGAAGCGGCTCCTTTGAACCACTTCTCTCAGCTCTAGC
TGCCAAATCTCAGTTGACACATCTGTCCATCGACGGAGGGAGTCTTACTA
TGCAGGAGACCTGCCAGTTGGTTCGCATCCAGAGCTTACGGCATTTCAAG
GGCTTCTACTCAACGACTGACTGTGTGGAGATGCTGGGTTGTCTGGCCAA
TCTGGAGGAGCTATGCGTCTCGATATTCTGCCCAACGGATATTTCCAATA
ATCTTCTGCCAATCATTGCAAAATGCAAAAATCTAAAGCTTCTGCAAATT
TCAGGAGGAAATGTCAATACAAAGTCCCTAAACGATGCTATTAGCCTTAG
AAAATCTGAACCAGTTGCCTTAGTCTTAAAAGCAAGCTTTCTAGACCAT

FMO05266.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG12520-RB 1407 CG12520-RB 677..1276 32..631 3000 100 Plus
CG12520-RC 1427 CG12520-RC 697..1296 32..631 3000 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:40
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12901378..12901977 631..32 3000 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:24:41 has no hits.

FMO05266.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:52 Download gff for FMO05266.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12520-RC 697..1302 32..639 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:47 Download gff for FMO05266.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12520-RB 514..1116 32..632 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:22 Download gff for FMO05266.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12520-RC 697..1302 32..639 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:22 Download gff for FMO05266.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 12901372..12901977 32..639 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:52 Download gff for FMO05266.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12894472..12895077 32..639 99   Minus