FMO05267.5prime Sequence
680 bp (680 high quality bases) assembled on 2008-08-22
> FMO05267.5prime
CTTCGTATAGCATACCTTATACGAAGTTATCAGTCGACATGCAGGTCCAC
CAGGCTGTGTTTGGAGCCGCCGTGCTCGGCATGCTGTTGGCCATCGGCTG
TTCCCTGCCCGTTTTGGATGCCAGTTCAGGCATCGACAACGCCACCATCG
AGGAGCTGAGGGCCAGCGTCAACGATACGCCCAAGAATCTCTATGTGGTC
AAGGCGGTGGTCTATGAGATCGGCATCCTGACGGAGGTGGGCGAGAATGA
CACCAGTTTTGAGAGCCAGGAACGCGTGGATCTGACCTTCTACGACACGC
ACAGCAACAAGAGTCACATTGACCTGGGCAACATCCCGCTGCCCATCCAG
ACCAATGTCACCGGTCAAGTGCTGACCGGCATCGCACCCGTGAATCTGGG
AGCCTTCAGCAGCCCCCAGGAACTCCTAGAAACCCTTCCCCTGACCGGAA
GCATTGTGAACATCACGCACAGCGACACCGCCTTCTATCAACTGAGCAGA
TCGAACACCAGTGCCGCGGACAAGCCACAGATTCTGGATCAGGATGCGCT
GGCCAAGCTCACGCACGCGGCCCAGTTGTTCCCGCCATCGTCGCAAATTG
GCCAGTCGGTGCCAGTGAACCCAGCTGCCGATAACGAGGTGCCCCAGACG
GAACCCGAGGATGCAAGCTTTCTAGACCAT
FMO05267.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14949-RA | 934 | CG14949-RA | 79..702 | 39..662 | 3120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2642416..2642887 | 662..191 | 2360 | 100 | Minus |
| 3L | 28110227 | 3L | 2643195..2643346 | 190..39 | 760 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:27:59 has no hits.
FMO05267.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:24:48 Download gff for
FMO05267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 79..712 | 39..673 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:48 Download gff for
FMO05267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 1..627 | 39..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:13:03 Download gff for
FMO05267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14949-RA | 79..712 | 39..673 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:13:03 Download gff for
FMO05267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2642406..2642887 | 191..673 | 99 | <- | Minus |
| 3L | 2643195..2643346 | 39..190 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:24:48 Download gff for
FMO05267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2642406..2642887 | 191..673 | 99 | <- | Minus |
| arm_3L | 2643195..2643346 | 39..190 | 100 | | Minus |
