FMO05268.5prime Sequence
600 bp (600 high quality bases) assembled on 2008-08-22
> FMO05268.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGGCGTACTCGGTGAC
GCCGCATCGGGCCAACCTGGTGCTGCAAATGCTGCTGCAGGCCAACACGT
ATGTGTCCATGGTGTGGGCCATGAGCTACATGATCCACATGCTCATACGC
CTGCATCATTTGTGGAACCTGGAGGGCCTGTCCATGCTGGTGGCCTACGT
TTTGGCGGTGTCCGCTGAATCCGTACGCCTATACGCCGGCTACTCGGTGA
ACCTGTGCTCTGGCGCCACCGCCATGTGGATGCTGCTCACCGTGACACCA
TGCATCCTGCTGCCCGCCATGGTCTTTCTTCGCCTCTCAGCTGCCGGACG
CAGTTTGTGGCTACGCATCATCACGAACGCCGTGTTCGCGCTAATAGTTC
TCGAGGTGATCGTGTCTCTGGTGCACTTTGTTATCTGCAAGCCAGGCTGT
AAGCTGCCGCTGCCGCTAGAAGGGAACGAGCAGCTGCCGGAGGAGGATGA
GGAGGAGCAGCAGCAATCCGCCAGTGTGGGCACACCCACGACCAATGAGC
AAAAGCGACGCGTGCGACGCTACCCGGAATCGGCAAGCTTTCTAGACCAT
FMO05268.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15642-RB | 1489 | CG15642-RB | 284..837 | 29..582 | 2755 | 99.8 | Plus |
| CG15642-RA | 1261 | CG15642-RA | 56..609 | 29..582 | 2755 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15466836..15467267 | 582..151 | 2160 | 100 | Minus |
| X | 23542271 | X | 15467353..15467474 | 150..29 | 595 | 99.2 | Minus |
Blast to na_te.dros performed 2014-11-28 18:53:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6887 | 452..559 | 115 | 58.6 | Plus |
FMO05268.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:27 Download gff for
FMO05268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15642-RA | 53..609 | 26..582 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:50 Download gff for
FMO05268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15642-RA | 1..552 | 34..583 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:39 Download gff for
FMO05268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15642-RA | 53..609 | 26..582 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:39 Download gff for
FMO05268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15466837..15467267 | 151..581 | 100 | <- | Minus |
| X | 15467353..15467477 | 26..150 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:27 Download gff for
FMO05268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15360870..15361300 | 151..581 | 100 | <- | Minus |
| arm_X | 15361386..15361510 | 26..150 | 98 | | Minus |
