FMO05269.5prime Sequence
660 bp (660 high quality bases) assembled on 2008-08-22
> FMO05269.5prime
TCGTATAGCATACCTTATACGAAGTTATCAGTCGACATGCTGGTGAGCTG
CCCGATCCTTTGTCCAGTTGAGAAACTGGTCACGGAACTCAAGAGGCACC
ACGTGATACCCCGCCTCTTTGCCTGCAAGCCAACGAAGGTGATCAGTGTG
CTATATCCCTGCGATATCGACATCAAACCGGGCATTATGGTAGTGATTAA
TGAGACGCTGAAGCAACCGATCATTCGGTTTAAGGCCGATCCGGAACACT
ATCACACGCTGATGATGGTCGACTTGGACGTGCCGCCGGACAATAATACG
GAGTGGCTCATTTGGATGGTCGGTAATATTCCGGGCTGCGATGTCGCCAT
GGGTCAGACGCTTGTGGCCTACGACAACCGGCGGACCATCCACGGCAGTA
ACATCCATCGAATCGTCTTCCTGGCCTTCAAGCAGTATCTGGAGCTCGAT
TTCGACGAGACTTTCGTTCCCGAGGGCGAGGAAAAGGGTCGTGGCACCTT
CAATTGCCATAATTTTGCAAGGAAGTATGCGCTTGGCAATCCGATGGCTG
CCAATTTCTATCTGGTGGAATGGTTATGGCGATGGACACCAACATACCTC
GTCTCGGAACATGAATTCGAACCTTCAAATGGAAATGAAAATGCAAGCTT
TCTAGACCAT
FMO05269.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30060-RA | 670 | CG30060-RA | 44..650 | 36..642 | 3035 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13422998..13423604 | 642..36 | 3035 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:17:47 has no hits.
FMO05269.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:30 Download gff for
FMO05269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30060-RA | 38..653 | 29..646 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:51 Download gff for
FMO05269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30060-RA | 1..609 | 37..646 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:46 Download gff for
FMO05269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30060-RA | 38..653 | 29..646 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:46 Download gff for
FMO05269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13422995..13423607 | 29..646 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:30 Download gff for
FMO05269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9310500..9311112 | 29..646 | 99 | | Minus |
