FMO05270.5prime Sequence
670 bp (670 high quality bases) assembled on 2008-08-22
> FMO05270.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGAGCACCATCAGA
TCTATCGCCACAAAAAGTTCGACATGGGTCGAAAGATTGAGAAATGCGAT
TTGCAGCTGAAGGAAGAGCTAATCTCCCGGAGCGGCACACCCTGCACCAG
TCGGAGTCCTTTCGATGCGGCAAATCAGTCCGTCAGCTTGGGTTTCAGTG
ATCAGGATGCTGACTTTCCTCCACTGCCAAAGCGTCGTCGTTTGGGATCC
TCATCCTCAAGCGTTTCCTACCAATCCGCCAGCCCCATCATAACCGAGGC
CATCCAAGACATCTTCAAGTACCACGTCAATATGGTGCGAAAATTCCCGA
AGAAGGAGCGTTCACCGAAGGATCAGGAGCGCCGCAACAAGAACACAATT
GCCTGCAGGATGAGTCGACGGAAGAAGAAGTTCGATGACCTGCAGATCGA
ACAGCAGTACAAGGAGTGCTCCGATGAGCACCTCAAGATCGCCGAACAGA
GTCTGCGTGCCAGGGTCTATTTGAATCATCTGAAGCAGCTGGTCAAGCAG
GAAGACCACCCGCTAGTATCCTCAAGGAGAGTTCCGGAGGAGAATACCAA
GAGTAACTTTAGCATCGACTACCTGATAGGTGGTATTAAACAGGAGCATG
CTGCAAGCTTTCTAGACCAT
FMO05270.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15479-RA | 863 | CG15479-RA | 66..683 | 35..652 | 3090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13233978..13234595 | 652..35 | 3090 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:53:55 has no hits.
FMO05270.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:25 Download gff for
FMO05270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 60..683 | 27..652 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:36 Download gff for
FMO05270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 33..656 | 27..652 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:38 Download gff for
FMO05270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15479-RA | 60..683 | 27..652 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:38 Download gff for
FMO05270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13233978..13234601 | 27..652 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:25 Download gff for
FMO05270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13233978..13234601 | 27..652 | 99 | | Minus |
