FMO05272.5prime Sequence
609 bp (381 high quality bases) assembled on 2008-08-22
> FMO05272.5prime
CCTTTTACGAAGTTATCAGTCGACATGCCACGAGGAAAGTTCCTTAGCTA
CAAGGGTCGCACTCGCCAGTTCACATCCCCCGAGGAACTGCGGCAGGAGT
CAGAGGACGATTACGACCAAGTCAGCGGCTCTGGTTCAGATAGCGATGAG
AAAGTAGCAACCAGGGGAGGAGCCAATTCATCCTCCTCCATAGCAAAGGA
TCGCACCTTGTAAAAAGCGACTCGCAATCAAAAATCGTCGTCAGATGAGG
TGGACAGTTCTTCCGAGGATTGCGAAACGGAATCTCGTGTTGCCAGAAAG
GGCGTGGCTTCACTCATTGAAATCGATAATCCCAACCGGGTGTCCAAGAA
GGGGCCACAAAAGATTTCAGCCATTATGCTTGATCAGACCTGGGCGGGGC
TATCCCGCCGCGATCAAGATCAGAGTGCTCGCAAGCGTTACGAGAAACTC
CATGTAGCTGGGAAAACCACCGAGGCTAGGGCCGACTTGGCCTGGCTGGC
TCTGATCCGGAAGCAGCGCGAAGAAACCGCTGCTAGGCGTGAAGCGGAGA
AGAATGCAGCTAATGTGGTCACCAAGAAGCCGTTTGCCAAGGCCAGCTTT
CTAGACCTT
FMO05272.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4438-RB | 922 | CG4438-RB | 174..741 | 24..591 | 2735 | 98.8 | Plus |
| CG4438-RA | 819 | CG4438-RA | 182..749 | 24..591 | 2735 | 98.8 | Plus |
| CG11444-RB | 1282 | CG11444-RB | 891..1061 | 421..591 | 390 | 81.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9397180..9397747 | 591..24 | 2735 | 98.8 | Minus |
| X | 23542271 | X | 4553338..4553508 | 591..421 | 390 | 81.9 | Minus |
| X | 23542271 | X | 4553853..4553983 | 154..24 | 325 | 83.2 | Minus |
| X | 23542271 | X | 4553591..4553692 | 374..273 | 255 | 83.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:35:45 has no hits.
FMO05272.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:33 Download gff for
FMO05272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4438-RA | 177..752 | 15..596 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:37 Download gff for
FMO05272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4438-RA | 13..588 | 15..592 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:22:28 Download gff for
FMO05272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4438-RA | 177..752 | 15..596 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:22:28 Download gff for
FMO05272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9397175..9397752 | 15..596 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:33 Download gff for
FMO05272.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9397175..9397752 | 15..596 | 97 | | Minus |
