FMO05274.5prime Sequence
659 bp (659 high quality bases) assembled on 2008-08-22
> FMO05274.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGCCGACAAACA
AAAATGTTCGGCGAGAAAGCCTTCGACCTGCTTAAAGAACTGGAGAGATC
GTCTCAGACAATTCCCGCCTTCGACGACGATGGGGTGCGCCAGGTGCTGG
AGGAGATCAAGGCGATATTCGAGGAGAACGTGGCCCAGGCCTCCAGCTAC
AATGCTTCCGGGGATCGCAGTCTGTGGCCCCTGCTCAACTTCAGGCACGC
AGCTCTCCAGAGGAACAAGCGGTGCCTGCTGGCCTACCTATACGAGCGGT
GCAGGAGGATCAAGGCCCTCAGGTGGGAGTTTGGACCCATTATCCCCGGG
GACATCAAGCAGGCACTCTGCGAACCGGAGGTCACCTTCTTCAACAACTA
CTCCAAGTCCCTGGCTGCCTACATGTGCAGTGCGGGCTACAACCAGGGCT
TGCCCATTGATCTAACCAACAATCTGCGTCCGCCCAAGTCACTTTACATC
GAGGTGCGCTGCATGGAGGACTATGGGAAGTTCGAGCTGGACGACGGCGA
GGTGATCCACCTGAAGAAGAACAGCCAGCACTATCTGCCCCGAGCTCAGG
TGGAGTCTCTCGTGAGGCAGGGCATTCTTCACCACATAGCCGCAAGCTTT
CTAGACCAT
FMO05274.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Psf1-RA | 692 | CG9187-RA | 4..609 | 36..641 | 2985 | 99.5 | Plus |
| CG32318-RA | 785 | CG32318-RA | 608..782 | 467..641 | 875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1247069..1247674 | 641..36 | 2985 | 99.5 | Minus |
| 3L | 28110227 | 3L | 1246076..1246250 | 641..467 | 875 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:43:58 has no hits.
FMO05274.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:25 Download gff for
FMO05274.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Psf1-RA | 1..609 | 34..641 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:15:49 Download gff for
FMO05274.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Psf1-RA | 1..609 | 36..642 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:51 Download gff for
FMO05274.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Psf1-RA | 1..609 | 34..641 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:51 Download gff for
FMO05274.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1247069..1247682 | 30..641 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:25 Download gff for
FMO05274.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1247069..1247682 | 30..641 | 99 | <- | Minus |
