FMO05275.5prime Sequence
540 bp (540 high quality bases) assembled on 2008-08-22
> FMO05275.5prime
ACTGCTGCAGGAAGTCGAGCAAGTCGAGGTTGCTTTTAAGCAGACCTTGA
GAAACATTACCGATATCCAGAACCGATACAAAACGGTTTCGGCCTTGAAG
AGCAAGGCCTCCAGGCGCCAGGAATCCTTCGAGGCGGAGATCCAAGGTGC
CATTACAGCACCCAATCCTGCCAAGAAAAGGAGGGTGGTCAAGAAGAGCA
AGATCAATATCTTGAAACAGAGGAGTCTGCTACCAATGCCAGTACCCAAT
CTCAGATCGGAAACTATCCTGCAGGTGGAGGAGCCTTTTGTGTGTCTCGA
AACGAATTGCGTCTACGAAATACACAAGACAACCACTCACCTGATGGCGC
GGAAACCATATGGAGCTCTCATCCGGCGACTGTATCGGTCAGCCAGGCGG
AAGAGGATGTACGACCAGGAGCAGGAACAGGATCAGGAACAGGTTGAGGA
ACAGGATCTGTATCCAGACATGGAATGTTACCACTGCTGCTGCTCAGCGT
GTTGCATAAAGTGCAGAGCAAGCTTTCTAGACCATTCGTT
FMO05275.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5139-RA | 802 | CG5139-RA | 152..665 | 4..517 | 2555 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1198602..1199115 | 517..4 | 2555 | 99.8 | Minus |
Blast to na_te.dros performed 2014-11-28 20:15:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 3425..3504 | 331..257 | 107 | 66.2 | Minus |
FMO05275.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:54 Download gff for
FMO05275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5139-RA | 88..610 | 1..526 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:15:50 Download gff for
FMO05275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5139-RA | 73..591 | 1..521 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:10 Download gff for
FMO05275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5139-RA | 150..672 | 1..526 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:10 Download gff for
FMO05275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1198595..1199117 | 1..526 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:54 Download gff for
FMO05275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1198595..1199117 | 1..526 | 98 | | Minus |
