FMO05277.5prime Sequence
610 bp (610 high quality bases) assembled on 2008-08-22
> FMO05277.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGCGTGGTGCTTCC
GCGACATTCGGCGCCACATGTGCATGCTGGTGCGTCAGAACTTCGCCAAA
AGTTGCGAGAAGAAGCTAAACGATCAGATCAACATGGAGTTGAAGGCATC
CCACCAGTATCTGGCCATGGCCTACCATTTCGATCGCTCCGATATCAGTT
CACCCGGAATGCATCGATTCTTCCTAAAGGCGAGCGTCGAGGAGCGGGAG
CACGCGGAGAAGATCATGACGTACATGAACAAGCGTGGTGGTCTAATCAT
TTTGAGCAGTGTACCACAGCCGTTGCCCTGTTTCGCCAGCACCTTGGATG
CACTAAAGCACGCAATGAAAATGGAACTGGAGGTCAATAAGCATCTGCTC
GATTTGCACGCCCTGGCTGGCAAGGAAGCGGATCCGAATCTCTGCGATTT
CATCGAGGCCAATTTCCTGCAGGAGCAAGTGGATGGCCAGAAGATTCTGG
CCGACTATATTAGCCAATTGGAGAAGGCACAAAACCAGGTGGGCGAATTC
CTGTTCGACAAGTATATGGGCAGCGGCATGCATCCTGCGAAAGCAAGCTT
TCTAGACCAT
FMO05277.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fer3HCH-RA | 751 | CG4349-RA | 96..656 | 32..592 | 2805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:18:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13107477..13107900 | 592..169 | 2120 | 100 | Minus |
| X | 23542271 | X | 13107961..13108099 | 170..32 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:18:20 has no hits.
FMO05277.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:40 Download gff for
FMO05277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fer3HCH-RA | 91..660 | 27..596 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:15:53 Download gff for
FMO05277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fer3HCH-RA | 1..561 | 35..595 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:05 Download gff for
FMO05277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fer3HCH-RA | 91..660 | 27..596 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:05 Download gff for
FMO05277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13107473..13107899 | 170..596 | 99 | <- | Minus |
| X | 13107962..13108104 | 28..169 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:40 Download gff for
FMO05277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13001506..13001932 | 170..596 | 99 | <- | Minus |
| arm_X | 13001995..13002137 | 28..169 | 97 | <- | Minus |
