FMO05280.5prime Sequence
683 bp (683 high quality bases) assembled on 2008-08-22
> FMO05280.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGTCGTTGCCCTT
GAAAGCCAGGGAATGACAGATATCGATGCAGTTCAGCTGGATCGAAAATT
TAGGAACCTGAAGAAGACCTACTATAGCATAAGGAGCAAGCTCCTGGCGA
AGGTACCGCATTTCCATCCAAACTGGCAGTTCTACGACGAGATGTCCGAA
ATTCTAAAGGATGACCCTGTCCCACCGCCGCAGGAACTTTCCATCAATGA
TTTCGATGAAGCGGTGGTCAGTTTGGAGACCGGTATCCAGAAAGGCAGGA
TGCTGTCTATGGGCACCACTGTCAGCACAGTTATTCCCCGCCAAATGCGT
ACGTATCGCAAACGAAAGCAGCCATTGGATGATGTCGATATCAAGATCCA
GAAGGACTACGAAGTGCAAACGGATCGGCAGCGGGATGGGGAACAGTTTA
CAGTCTTTAATGCCGCCGAACCCAATACTAATGATTTGTCAGAGTCTGCG
GCCGAGATCTCCATCAGCAACGACGAAGAGGCATTGAGACACCTAAGAGC
GCTCCAGGAGTACGCCATGATCCATGATAATTTCAGGGCCATAGGACTGC
TAATACAGGTGGAGCACGCCATTCAATATCCAGCCCAGATCAAGGACTTC
GAGGTGGATCAAACGGCAAGCTTTCTAGACCAT
FMO05280.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13896-RB | 972 | CG13896-RB | 218..847 | 36..665 | 3150 | 100 | Plus |
| CG13896-RC | 974 | CG13896-RC | 220..849 | 36..665 | 3150 | 100 | Plus |
| CG13896-RA | 1000 | CG13896-RA | 246..875 | 36..665 | 3150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 710945..711574 | 665..36 | 3150 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:46:50 has no hits.
FMO05280.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:23 Download gff for
FMO05280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13896-RA | 243..875 | 33..665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:15:57 Download gff for
FMO05280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13896-RB | 215..847 | 33..665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:08 Download gff for
FMO05280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13896-RA | 243..875 | 33..665 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:08 Download gff for
FMO05280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 710945..711577 | 33..665 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:23 Download gff for
FMO05280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 710945..711577 | 33..665 | 99 | | Minus |
