FMO05281.5prime Sequence
688 bp (688 high quality bases) assembled on 2008-08-22
> FMO05281.5prime
TAGCATACATTATACGAAGTTATCAGTCGACATGACCTCCTCTTTGGCCA
AAATCGAGGACTTTCCCTCCGATCCCGTTGAATTTTTTAAGGAGATCCTT
CAGGAAGCTGCCAAGGGACATCCCGATGGATTCATACAGGAAATGAACCT
GGCCACCGTGGACGAGGAATTCGGTGTGCTCAACCGCACTGTTCTGTACC
GCGGACTCACCCAGGATAACTGTGTGTTCTACATCACCCATCGGTACGTT
CGCAACTTCAAGAACCTTCAGGCCAATCCCAAGGCCTGCATCACCTTCTA
TATGCCAGATGTTAAGGATAAGGCCGGAAATCAGAATGCCTGGCAGGTGA
GATTGATTGGAGCCACCGCCGTGGAACTTGACCAAAGCGAAATGGATGCT
TTGTGGGCGAAGGAGAATTTGGCTGCCCAAATCAGGGGTCACATCTGTCC
CTGTGGAGAACCGATTAACTACGATGATCTCAAGGCAAAGCACGATCAGT
TCCTTCTGGATCACAGAGGAAAATCCATCGAGAGACCAGCAAGCTATACC
GCTTGGAAATTCCAACCGCAGCGTTGGGACTTCCTGAAGGTGGGTCTCGA
CCAAATCGCAGACCGGGTGCAGTACCGCCTTCAGAAGGATGGGAAATGGA
AATCCATGCACGTGTCCACCGCAAGCTTTCTAGACCAT
FMO05281.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15343-RA | 948 | CG15343-RA | 136..774 | 32..670 | 3195 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8272693..8273207 | 546..32 | 2575 | 100 | Minus |
| X | 23542271 | X | 8272498..8272621 | 670..547 | 620 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:58:36 has no hits.
FMO05281.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:33 Download gff for
FMO05281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15343-RA | 129..779 | 24..678 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:15:59 Download gff for
FMO05281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15343-RA | 1..642 | 32..674 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:36:30 Download gff for
FMO05281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15343-RA | 129..779 | 24..678 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:36:30 Download gff for
FMO05281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8272493..8272621 | 547..678 | 96 | <- | Minus |
| X | 8272693..8273214 | 24..546 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:33 Download gff for
FMO05281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8166526..8166654 | 547..678 | 96 | <- | Minus |
| arm_X | 8166726..8167247 | 24..546 | 99 | | Minus |
