FMO05282.5prime Sequence
948 bp (732 high quality bases) assembled on 2008-08-22
> FMO05282.5prime
GCATACCTTTAACGAAGTTATCAGTCGACATGGCTCTCACCAAAGTTTAT
GATGCCGCCACAGTGTTTAAGCACATGAATGGCATTCTAAATGTGTACAA
GCCATCCGGTATGAAGGTGAAACACGTGCGCAATGCTATTCTGAGCAACA
TTTGCAAGGGACTCAACGAAATGGAGCAGAGGAAACCACGCAAGTTGCAA
GAGAACATTAGCCTCCTGGGCACAGGCACTGCAGCAGATCACGTACTACA
TAACATAGGAGAGCAGACGGATCTATCCGACCACCTTCTGTCCACCGGAC
CGCGGTACCTTCCGCGAGACTTGATCTGCACCACAGTGTCCAGCCTGGGC
GATCACACCAGCGGAGTCCTGCTCTTTGGGATCAACAGGGGAGCAGGCCA
GTCTAGTTCTATTCGGAAAAATCGACCAGTGCGGGTCTACCATCTAATCG
GGCACCTAGGCATCGCAACCGAAAATAACCTACCAGACTCACGGGTCATA
ATGCGCTCCAATCACCGACACGTGTCCGCAGACAGGATCAGCAGTCTAGC
CGCCTCCATGTAGGCATCCCATCATCGTAAGATGTTTGAGCTCTGCGGTG
TCGATTTGCAAACCCAGGAGGCCTATGAACTGGCCTGTAGGGGTCTCCTA
CGCCCAGCGGACGACAGTCAGCCCGTCTCTACGGCATTAAAGCTGATTCA
CTTCGATCGACCGCACTTCCACCCTGGAACTGCACCCCATCAACGAGATG
CAGGAGTACTTAGCTTCGCTTAGTGCACGATATGGCTTTTGGACCTCCGA
ACCGTGGCGCACTGCTTCCCAAACTACGCTGCGTGGGGCATGGCCATTTG
ATGTGACAGATAGTCTGCTCAGACCCCCCGGCATTGGCCAGGAATTATCA
AGACCTCCGTCCAAAACGGGACCACCCGGAGGGCGCATCACAGCTTCT
FMO05282.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7849-RB | 1075 | CG7849-RB | 67..983 | 30..948 | 4065 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6077423..6077986 | 373..939 | 2070 | 94.9 | Plus |
| 2R | 25286936 | 2R | 6077160..6077373 | 159..372 | 1070 | 100 | Plus |
| 2R | 25286936 | 2R | 6076976..6077106 | 30..160 | 655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:45:18 has no hits.
FMO05282.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:42 Download gff for
FMO05282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7849-RB | 56..957 | 18..922 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:14:53 Download gff for
FMO05282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7849-RB | 1..891 | 30..922 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:57 Download gff for
FMO05282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7849-RB | 56..957 | 18..922 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:57 Download gff for
FMO05282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6076965..6077105 | 18..159 | 96 | -> | Plus |
| 2R | 6077161..6077373 | 160..372 | 100 | -> | Plus |
| 2R | 6077423..6077970 | 373..922 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:42 Download gff for
FMO05282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1964666..1964878 | 160..372 | 100 | -> | Plus |
| arm_2R | 1964470..1964610 | 18..159 | 96 | -> | Plus |
| arm_2R | 1964928..1965475 | 373..922 | 95 | | Plus |
