FMO05283.5prime Sequence
695 bp (695 high quality bases) assembled on 2008-08-22
> FMO05283.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGCCAATACGAC
TATCTGTTTAAGATTCTCGTCCTGGGTGACATCGGCGTGGGCAAATCCTG
CCTGCTGATGCGTTTCTCGGATAACCGATTCACCGAGAAACACGTGTGCA
CGGTGGGCATGGATTTCAGGGTGCGCAACGTGGAGTTGGCCGGTCGGATG
GTTATGCTGCAGATCTGGGATACCGCCGGCGATGAGCGCTTTAAGTCGCT
GCTGCCATCCTATTATCGCGGTGCCCATGGCATACTGCTCGTTTACGACA
TAACGTCGTCCAAAAGTTTCCGAAACATCGATGGCTGGCTGAAGGAGATA
CGGCGCATGTCTTCGGAAAGTGTGAACGTCATGCTGGTGGGCAACAAGTG
TGATGATCTGGATAATCGTCAGGTGCGCATGGAGCAGGGTTTCAACTATG
CCAATCATCGGGCACTCGGCTTTTATGAGGTTTCCGCCAAGAGTGGCGCG
AATGTAAATGACGTATTCAACATGTTGTCAGTTGGCATATACAATCGTCT
TGTGATTCATACCCCAAATCGCTTGTCAGGTGGGCAAGAAACGGAGGACA
CTGCAGAGCCACCGGATGAACCAATCAATTTAGCTGGCAAAGATCGGCAG
AGGGCCAAAGACAGCAATACCTGCTGTGCAAGCTTTCTAGACCAT
FMO05283.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rab9Fb-RA | 878 | CG32670-RA | 68..709 | 36..677 | 3210 | 100 | Plus |
| RabX2-RA | 791 | CG2885-RA | 68..717 | 36..677 | 1610 | 83.9 | Plus |
| Rab9Db-RA | 871 | CG9807-RA | 68..712 | 36..671 | 1280 | 81 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10951778..10952419 | 677..36 | 3210 | 100 | Minus |
| X | 23542271 | X | 10417496..10418122 | 36..658 | 1535 | 83.7 | Plus |
| X | 23542271 | X | 10622514..10623158 | 671..36 | 1220 | 80 | Minus |
| X | 23542271 | X | 10589182..10589826 | 36..671 | 1175 | 79.5 | Plus |
| X | 23542271 | X | 10661114..10661758 | 671..36 | 1175 | 79.5 | Minus |
| X | 23542271 | X | 10950319..10950963 | 671..36 | 1160 | 79.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:59:43 has no hits.
FMO05283.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:41 Download gff for
FMO05283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab9Fb-RA | 68..722 | 36..692 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:15:46 Download gff for
FMO05283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab9Fb-RA | 68..722 | 36..692 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:07 Download gff for
FMO05283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab9Fb-RA | 68..722 | 36..692 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:07 Download gff for
FMO05283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10951765..10952429 | 19..692 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:41 Download gff for
FMO05283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10845798..10846462 | 19..692 | 98 | -> | Minus |
