FMO05285.5prime Sequence
924 bp (924 high quality bases) assembled on 2008-08-22
> FMO05285.5prime
AGCATACATTATACGAAGTTATCAGTCGACATGCAGAAGGCCATCAAGAA
GGAGCTCAGCTTCTCGCTGGACACGCTGGAGCGCTATAGGGCCAAGTACG
GACGCAGTGCATCGCTGGACACAAACGGCACACCAATTGCACACACAGAC
GGCGACCAGGCTGCTCCTGCGCCGCCACCGCCCTCGATCTTCACAAAGTC
GTTGTCGCCACCAAAGATGACCAAGCTTCAGGAGTTGCAGCAGAAGAAGG
AGGCCTATTTAAGGGCCAAGGAGCACGAGCGGGAAATGGAGCAGCTGCAG
CGCACAGAAAGAAGGTCCATCATAAATGGTTCGGATACGCCCAAGCCCAA
GACAGGCAGTCCAACGAGCACTTCACCGACTCCCAATGCAAGTTCCTCGT
CAACCGCTGCCGTGGCTACCAAGACCTCCAGTCCAGCTGGCTACACCAAC
TGGTCGAATCACCATGCCACACTCTGCTCCCAGTCGTGGGTGGCCATCTC
CGAGCTCATGTACTTTTGCGACAAGTATGAGTTCACCACCCTCAGCACAC
GCGATCTGAGGACGCACCAGGAGATCGTGGCCGAGGTGAGAGCTCTGCTG
TCCGGCAAGGCGCCCTTCGATCAACGCACCCGCTTCCCGGGTAACATTCA
CGATCCGGAGAACTTGTGGGTTTGCATCGGTCGCTGTGCCAGCGTGGAAT
ACCATCTGCAGCGCATCATCAGCATCTTTCGCAAACCTCTCAATCAATTG
ACACCGGACAAACAGCGAACGGTGCGTCAGATTTCCACCTGGCGGTCAGC
GAACTGCGGCTGGACATCTCGGCGAGGATTTAGCGAGGTGCGGCTGTACG
ATCGCCTGTTCTTTGAGCGCGAGTTCCGGCTGGAGTGGCTGGATGAAGAA
GCCGCAAGCTTTCAGAACCATCGG
FMO05285.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13144-RA | 1555 | CG13144-RA | 90..963 | 30..903 | 4280 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10490492..10491365 | 903..30 | 4230 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:54:06 has no hits.
FMO05285.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:32 Download gff for
FMO05285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13144-RA | 59..938 | 23..903 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:16:05 Download gff for
FMO05285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13144-RA | 1..876 | 31..904 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:44 Download gff for
FMO05285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13144-RA | 84..963 | 23..903 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:44 Download gff for
FMO05285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10490490..10491371 | 23..904 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:32 Download gff for
FMO05285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10490490..10491371 | 23..904 | 98 | | Minus |
