FMO05286.5prime Sequence
808 bp (808 high quality bases) assembled on 2008-08-22
> FMO05286.5prime
CATACATTATACGAAGTTATCAGTCGACATGCATATCGTGAGTGGCAAGA
ATCTGAGCCGCGAAGAGTTAGAGGAAGTTAACAAATGGATGCAACAAAAT
AGTATTAGCACTCAAAGATTGCGTCGCGAGTTTTCCGATGTTTTGCCGCT
GGCCGAAATATTCAAACGCGATTATCCGCGCTTGGTGGATCTCTTCAATT
ATCCGAAGAAGAGTAGTGTTCAGCTGAAGTTGGCCAATTGGGAGACATTC
AACTTTAAAGTGTTATCCAAGTTAAATATGACGTTGACTAAAGATTTTAT
GGAGCAAATGGCGAATGGTGTTAGTGGTGCCGCCGAAGTCATGTTGCATG
AAGTGATACGATTGGAGAAACGACAACGCCTTGCAGAACAACGAAATGCG
GCATTGCGGCAGGAACAACTTTGGGAGGAAAATGATGAGATAAAAACTGT
TGTGGTTAACAAACAGATCGGCGATGGCATAGTTCAGGTGCCGCAGAAAA
TGATCCTATATTCGCTGTACGAGAAAGTGGAACGTGATAGTCATGCAAAA
GATGTTATTATCGATGCCTATCAACAGCGATTGACCCACATGGAGAGTAT
TATTAAATTGAAAACGGAACGGATCGACGAACTTCTAATGCAGATGGGTA
AACAACCTCAAAAGAGAGCTACTAGCAACGCAACCAATTGTTTCTTTGCT
TACGATGGAAAGAACTCCCTAATTCAGAAGCATATAAGTCCTACGCAAGC
ATCATCGCCTACCCATCTGGATGCGGACGGCTTTAACATCGCAAGCTTTC
TAGACCAT
FMO05286.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:15:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12395-RA | 997 | CG12395-RA | 125..886 | 29..790 | 3810 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:15:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16062013..16062774 | 790..29 | 3810 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:15:55 has no hits.
FMO05286.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:07 Download gff for
FMO05286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-RA | 79..846 | 22..794 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:16:06 Download gff for
FMO05286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-RA | 57..824 | 22..794 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:35 Download gff for
FMO05286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12395-RA | 122..889 | 22..794 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:35 Download gff for
FMO05286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16062010..16062777 | 22..794 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:07 Download gff for
FMO05286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15956043..15956810 | 22..794 | 99 | | Minus |
