FMO05293.5prime Sequence
827 bp (827 high quality bases) assembled on 2008-08-22
> FMO05293.5prime
CGTATAGCATACCTTATACGAAGTTATCAGTCGACATGAATCGTTTGCTA
TTGAGTGTGGTGGCGCTGGTCGCCCTGGCTGCTTCCTGCCATGGAAATCC
GGGACTGGACTTCCCCTTCGGTCGGATTGTGAACGGCGAGGACGTGGATA
TCGAAAACTACCCCTACCAGGTGTCCGTCCAGACGACCAAGGGCTCCCAC
TTCTGTGGCGGAAGTCTGATCGATTCGGAGACCGTCCTGACCGCCGCCCA
TTGCATGCAATCCTACGCCGCCAGCGAGCTGCAGGTGCGAGTGGGTTCCA
CTTCCAGGAGCTCCGGTGGTGAGGTGGTCACCGTCCGCGCCTTCAAGTAC
CACGAGGGCTACAACAGCAAGTTGATGATCAACGATGTGGCCATCATCAA
GCTGAGCTCTCCCGTTCGCCAGACCTCTAAGATCCGGGCCATCGAACTGG
CCGACTCCGAGGCCGTTTCCGGAACCAATGCCGTGGTCTCCGGCTGGGGC
ACCACCTGCTTCCTTTTCTGCTCCTCCCCCGACACCCTTCAGAAGGTGGA
GGTTGATCTGCTGCACTACAAGGACTGTGCCGCCGACACGTACAACTACG
GCAGCGACTCGATTCTGGAGACCATGGTCTGTGCCACCGGCGAGAAGAAG
GACGCCTGCCAGGGTGACTCCGGTGGTCCTTTGGTCGCGGACAACAAGCT
TGTGGGCGTGGTTTCCTGGGGCAGCGGATGTGCCTGGACCGGCTACCCCG
GCGTCTATGCCGATGTCGCCAGCCTGAGGAGCTGGATCGTTGACACCACT
GACTCGTTGGCAAGCTTTCTAGACCAT
FMO05293.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17571-RB | 1205 | CG17571-RB | 263..1036 | 36..809 | 3870 | 100 | Plus |
| CG17571-RA | 965 | CG17571-RA | 23..796 | 36..809 | 3870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20256157..20256930 | 809..36 | 3870 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:51:48 has no hits.
FMO05293.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:50 Download gff for
FMO05293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17571-RA | 15..799 | 28..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:16:16 Download gff for
FMO05293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17571-RA | 98..882 | 28..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:06 Download gff for
FMO05293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17571-RA | 15..799 | 28..813 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:06 Download gff for
FMO05293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20256153..20256938 | 28..813 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:50 Download gff for
FMO05293.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20256153..20256938 | 28..813 | 99 | | Minus |
