FMO05303.5prime Sequence
1199 bp (1028 high quality bases) assembled on 2008-08-22
> FMO05303.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCAGGATGCCAC
GGCTCCGGATCCGGAACCCAGCAGCACCAACGGCAATTGCTCCGTTGAAC
ATGACAATCGGCAGGATCAGGATGAGAACCACGTAGGCGCCGAGCGGGAA
GCGGAGGCCAACGATGCCAACTGCACCGTTTGTGGTGCCGCCAAGGCATC
GGCGCTTTTGGATCTGCGCTCCAACCATGTAATGCAACGTCGCCTAAGTC
GCGACTGGAAGATTCATGCAGATGTAATCCGATCCACATTGAAGGCCATT
TGCGTGGAGTGCGTGTGCAAGCTGAACATGCACTCGGAGGTCACTCGATC
CCTGATGCAGCGCATGCAACGGCTGCAGCGTTCCGGTGGTGAAACCACCA
AGGTGACAACCACCACGACATCGCCCAGCCAGCACAGTCCACCCATTGCT
GATGCAGAGGTGTCGACCACCTTGATTGAGAGTCAGGAGGAGGTGGCCCA
CAGCGGGCAGAGCGTTCGCTCGCGTTCTTCCTGCTCCGTGCTGGAAGTAT
ACCTCGCTCAACAACCATATTCTCCATCGGCCAAGGAAACGGAAGAGAAG
CATGCGGAGGGCTGGAAATGGCGAACACGGCTGGAGTGTCACGAATGTGG
TCGGGCCTATTTTCGACGGGATTACTACGCCCAGCACTTGAGGCGCTGCT
CCAAAACGCGCAGGAAGCAGCCACGTCCATCGCGCGTCAAATGCCGGGTA
CTAAATGAGGCGAGCTATGATGAAGAGGCGCCATCCAGAGCCATCCGATC
ATCGCGCATATACTACTGCCGGCATTGCGACGCAGAGTTTGAGACCTTAA
TCAGTAAGCGACAGCATGAGCGAATGAAGCATCAGCAGCGATATCCGTGT
GATTTGTGCGAAGCCCAGTTGGACACGAAGTACGAGTGGGAAATGCATCA
CACATCTGCCAGCCAGCAGAGCTAGCATGTGAGCAGCAGAGCTGCAAACG
TATGACTCCCGGTGCAGGCATGCTCGATGCGCTCTCGCTCACGCATGCTC
GAGCTGTATGTACACTGATGAGGAGAAAGACAAGAATGAAATGAAGCGGT
GGGAGAACTAAAGCCAGAAGAGCAGTACCGGCACATGACTTACGGCCTGA
ATGTACATGGCGCATGCACGCTGACTCTCTCCCTTTTACGAAATATCGA
FMO05303.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11906-RA | 2289 | CG11906-RA | 180..1216 | 37..1050 | 4670 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19282794..19283483 | 953..264 | 3435 | 99.9 | Minus |
| 2R | 25286936 | 2R | 19283551..19283782 | 268..37 | 1160 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:02:31 has no hits.
FMO05303.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:13:46 Download gff for
FMO05303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11906-RA | 173..1115 | 29..969 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:19:12 Download gff for
FMO05303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11906-RA | 183..1125 | 29..969 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:48:01 Download gff for
FMO05303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11906-RA | 173..1115 | 29..969 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:48:01 Download gff for
FMO05303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19282794..19283479 | 268..953 | 100 | <- | Minus |
| 2R | 19283552..19283786 | 29..267 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:13:46 Download gff for
FMO05303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15170299..15170984 | 268..953 | 100 | <- | Minus |
| arm_2R | 15171057..15171291 | 29..267 | 98 | | Minus |
