FMO05305.5prime Sequence
1229 bp (1061 high quality bases) assembled on 2008-08-22
> FMO05305.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGATATGCCGAC
TCTGCCTGGAGGATGCTGAGCACGGGGTGCCCATTTTCGGCCAGGAACCG
CCAATGGGACAACCGGCACATCGCCAGCTGGCCGAGCTGATCGAGCGACA
TCTGCTGCTGGTGTTGGCGGAAAACGACGTGGTGTCCACGTGCCTGTGCA
ACCGCTGCTGGCGGCAGCTGGCCGAGATCGAGCAATTCTGTTCCATGGTA
GCGGAGAAGCAGCGGTCGCTGCACCGCTCCTTGCAGCTGAAAACTGAATT
GCCGGAGCTGCCCGAACTGACGGAGCCGGAGCCCGCCCTGGTCGTGTGGA
ACACGGAGTCGCCAATCGAGCCAAAGCTCAGCTATGAGGGCGATGACATC
AAGGATCACATACTGTGCGAACCCGTCATCGACGCCTTGTCCGCGGGCGA
TGAAAAAGACAGTGACTATGGCGACACCTTTGAACCGGACTTCGAGCCGG
AATCGCAGCCAGATGAAGAAGAAGAACCGGAGCCGGATCCGGTAAAACCG
CGCCCCAGGGGCAGGCCGCGCAAAACTGCGCTGCAGCAAACGCATCAAAT
CATCAAAAGGAAGTACGAGAAGCGCAAACAGCAGAACAAGGCCAAGATCA
CAGAGTTATCATTACGGGAATCAAGAGCCCGGCAAAGGGAACTTAAACGC
AGCAGTGCTGGAGCAGAGGATGATCAGGATGGCGACGAAGACGAGGAGGA
CGAAGAAGATGTCGGGGGCGAGCTAACACCAGATGCCGACGAACAGCCAA
AGCCGCGCGGCAAACGTGGCCGACCCAAGACCAAGAAACTGGTAACCGCC
GACGATAATGATGATACCTCGGAGTGCCCGTCAAGCGCAGCAGCATCAAG
AAATGGACGACTATATAGCCGCAATGTTAAGCTCGACTGCGCATTTGCGC
CGCCCCGCTGAAGACTTCACGATCTCAAGCGCACTTTCGCGTGAGCACGA
CTGCACTGCTTTGTGAAGTGCTGCACATCGGTACAAGAAGCGAACCCTGT
ACGTCGACATTTGCACTGCCCAAGATCCGCAGTACTTACTGCTAACTGCC
GCAAACTTCTACGAAGCAGGTGATGCAATGCTGGCTTCACTCCGACACAA
ACTTGTCCATGTGCCCACTCGAAGGCTGCGAATCCGGAACTGACTCTTAA
GGACCAGTCAAGCGTCCGAGGTGTGCAGC
FMO05305.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11696-RA | 2235 | CG11696-RA | 128..1191 | 38..1087 | 4925 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11574052..11574971 | 163..1070 | 3975 | 98.3 | Plus |
| X | 23542271 | X | 11573858..11573983 | 38..163 | 630 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:37:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G6 | 2042 | G6 G6_DM 2042bp | 557..667 | 732..839 | 150 | 64.3 | Plus |
FMO05305.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:57 Download gff for
FMO05305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11696-RA | 119..1212 | 26..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:19:16 Download gff for
FMO05305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11696-RA | 49..1142 | 26..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:28 Download gff for
FMO05305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11696-RA | 119..1212 | 26..1104 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:28 Download gff for
FMO05305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11573849..11573983 | 26..163 | 96 | -> | Plus |
| X | 11574053..11575011 | 164..1104 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:57 Download gff for
FMO05305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11467882..11468016 | 26..163 | 96 | -> | Plus |
| arm_X | 11468086..11469044 | 164..1104 | 97 | | Plus |
