FMO05317.5prime Sequence
1246 bp (1033 high quality bases) assembled on 2008-08-22
> FMO05317.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGCAAAAAGTGCTGG
GACGCATCCAGGCGCAGGTCCTCCGCTCCCGGGCGACGAATGCATTAGCC
AATGTGGTTAGACACGAGGCCACCTCCTCCAGGACAGCGGCTAAACCAGC
CGCCACATCCAAAGAATTCCGGGAGAGACAGGTGCGATTCAACATAAAGA
ACGAACAGACCGAGGGTAGACCACTTTACCTGGATGCCCAGGCCACCACT
CCAATGGACCCACGTGTATTGGACGCTATGCTCCCCTATCTGACCAATTT
CTACGGAAATCCCCACTCCCGTACCCACGCCTACGGTTGGGAAACAGAGT
CCGCTGTAGAAAAGGCCCGCGAGCAGGTGGCCACCCTGATTGGCGCCGAT
CCCAAGGAGATCATCTTCACATCCGGCGCCACCGAGTCGAATAATATCGC
AGTAAAGGGTGTTGCCCGTTTCTACGGCACTAAGAAGCGACACGTGATCA
CCACCCAGACGGAGCACAAGTGCGTGCTGGACTCTTGTCGTGCTTTAGAG
AACGAGGGCTTTAAAGTCACGTACCTGCCAGTGCTGGCCAACGGACTCAT
CGACCTCCAGCAACTGGAGGAAACCATCACATCGGAGACCTCGCTGGTGT
CCATTATGACGGTGAATAACGAAATCGGCGTACGGCAACCCGTCGATGAG
ATTGGCAAACTGTGCCGGTCTCGCCGAGTATTCTTTCACACGGATGCCGC
TCAGGCGGTGGGAAAGGTCCCGCTGGACGTTAACGCCATGAACATTGACC
TGATGTCTATATCCGGCCACAAAATCTACGGCCCAAAGGGTGTAGGCGCC
CTGTATGTCCGACGAAGGCCGAGGGTTCGCCTCGAGCCCATCCAAAGTGG
CGGCGGCCAGGAGCGTGGCCTAAAGAGCGGACGGGTTCAGCCCCGCTCGC
CGTGGATTGGGAGCTGCTGCGGAACTTTCTTTGCGTGAGATGACTACGAC
AAGAAATGGGTGACTTTCTTTCCAATCGCTGCTGACAGGATTTCAGTGCC
TTGCCGCATGTCATCAGAATGTGATGCAAAGCAATACAATGATGCTGAAT
TGTCGTGGCTTATGTCGAGGCGAGTCCTACTGATGATTTTAAGGACTGCT
GAACATGGGTCGCCTGTCACTCGCTCTGAACTCTTATGTTCTGCGTCATT
GACCGAGAAGGAACTTGTCCCAGGTCTAATGACTTGTGTATCTCGA
FMO05317.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12264-RA | 1533 | CG12264-RA | 72..1202 | 35..1146 | 5045 | 97.5 | Plus |
| Qtzl-RC | 926 | CG31864-RC | 75..351 | 35..311 | 1385 | 100 | Plus |
| Qtzl-RA | 672 | CG31864-RA | 75..351 | 35..311 | 1385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11999911..12000822 | 163..1067 | 4150 | 98.8 | Plus |
| 2L | 23513712 | 2L | 11996000..11996148 | 163..311 | 745 | 100 | Plus |
| 2L | 23513712 | 2L | 11995814..11995943 | 35..164 | 650 | 100 | Plus |
| 2L | 23513712 | 2L | 11999725..11999854 | 35..164 | 650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:49:00 has no hits.
FMO05317.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:56 Download gff for
FMO05317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12264-RA | 65..1111 | 27..1067 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:19:37 Download gff for
FMO05317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12264-RA | 65..1111 | 27..1067 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:54 Download gff for
FMO05317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12264-RA | 65..1111 | 27..1067 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:54 Download gff for
FMO05317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11999713..11999854 | 21..164 | 95 | -> | Plus |
| 2L | 11999913..12000822 | 165..1067 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:56 Download gff for
FMO05317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11999713..11999854 | 21..164 | 95 | -> | Plus |
| arm_2L | 11999913..12000822 | 165..1067 | 98 | == | Plus |
