FMO05319.5prime Sequence
549 bp (549 high quality bases) assembled on 2008-08-22
> FMO05319.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGATGTCTGC
CACGTGCTACAAGTGCAACCGGCCGGGCCACTTTGCCCGGGACTGCAGTC
TCGGCGGCGGCGGAGGTCCGGGCGGCGTTGGAGGAGGCGGTGGTGGCGGC
GGCGGCGGTATGCGCGGCAACGATGGCGGCGGCATGCGTCGCAACCGCGA
GAAGTGCTACAAATGCAACCAATTTGGGCACTTCGCACGTGCCTGCCCCG
AGGAGGCCGAGCGCTGCTACCGCTGCAACGGCATCGGGCACATCTCGAAG
GACTGCACCCAGGCGGACAACCCGACCTGCTACCGTTGCAACAAGACCGG
ACACTGGGTGCGCAACTGCCCAGAGGCCGTCAACGAACGTGGACCGACCA
ATGTGTCGTGCTACAAGTGCAACCGCACCGGACACATCTCCAAGAACTGC
CCGGAGACCTCGAAGACTTGCTACGGCTGCGGCAAGAGCGGACATCTGAG
GCGCGAGTGCGACGAGAAGGGCGGACGGAACGCAAGCTTTCTAGACCAT
FMO05319.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3800-RB | 2068 | CG3800-RB | 213..707 | 37..531 | 2460 | 99.8 | Plus |
| CG3800-RA | 2509 | CG3800-RA | 566..1060 | 37..531 | 2460 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22936018..22936512 | 531..37 | 2460 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:49:55 has no hits.
FMO05319.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:11 Download gff for
FMO05319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3800-RA | 559..1065 | 30..537 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:19:40 Download gff for
FMO05319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3800-RA | 412..918 | 30..537 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:18 Download gff for
FMO05319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3800-RA | 559..1065 | 30..537 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:18 Download gff for
FMO05319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22936013..22936519 | 30..537 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:11 Download gff for
FMO05319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18823536..18824042 | 30..537 | 98 | | Minus |
