FMO05324.5prime Sequence
1136 bp (1029 high quality bases) assembled on 2008-08-22
> FMO05324.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCCGGTATTGG
CATCAATGGCTTTGGCCGAATCGGTCGCATGTTTGCCCGCCAGGCTCTAG
TTCGCAAAGATGTCAAGATCGTGGCAATCAACGATCCCTCACTGGATCCC
AAGTATCTGGCCTACATGCTGCGATACGACTCCACTCATGGACAGTTCAA
TCAGAAGATCTCTGTCGACGGGAACAATCTTGTTGTTAATGGCAAGAAGA
TCCAGCTGCTTAAGGAGTCGGACGTCAAGAAGATTAAATGGTGCGACCTG
GGCGTGCATACGGTGGTGGAGTGCTCCGGTAGGTTTACCACCCTGAAAGC
CTGTCAAGGTCACTTGGATAGTGGGGCCAAAAAGGTGGTCATATCGGCAC
CATCTGCCGATGCTCCGATGTTTGTGTGCGGAGTGAATCTTGAGGCATAC
AAGCCGGGCACAGCAATCATCTCGAATGCCTCATGCACAACCAATTGCCT
GGCGCCGCTGGCCAAGGTGGTGCACGATAACTTTGAAATATGTGAGGGCC
TTATGACCACCGTTCATGCGGCTACAGCTACCCAAAAGATCATCGACGGA
CCCAGCAGCAAACTCTGGCGGGATGGACGCAGTGGCATGACCAACATCAT
ACCCGCATCCACGGGAGCCGCTAAAGCCGTCGGCAAGGTGATTCCGGATC
TAAACGGGAAGCTAACGGGTATGGCTTTCCGTGTACCAGTTCCCAATGTC
TCGGTGGTGGACCTCACCTGTAGGCTTTCTAAGCCCGCCAAATGGACGAT
ATCAAGAAGTGCATAAAGGCTGCATCCAAATGCGAAATGAAGGAATCCTG
GGGTATGTGGAGGAGGAGGTGGTGTCCACCGATTTTAACGGCTCACGATT
TGCATCCGTCTTTGATGCCAGCCTGTATTGCCCTAAACGATACTTCGTCA
GTTGATCAGTTGGTACGATAACGAGACCGGATATTCCTGCCGTCTCCTGA
CCTAGTTCTCTATGCCCAGTGTCGACCATGCATGCGAGAAGGTGCTGCCG
CAAGCTTTCTAGAACATCGTTGGCCGCCGGGCCCAGGTAGGTGTCATATC
TTATCATATCTATTCTATCCCCACCTAGCTAGAGAT
FMO05324.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9010-RA | 1253 | CG9010-RA | 101..1112 | 37..1037 | 4805 | 98.9 | Plus |
| Gapdh2-RC | 1377 | CG8893-RC | 372..770 | 360..758 | 455 | 75.6 | Plus |
| Gapdh2-RA | 1443 | CG8893-RA | 438..836 | 360..758 | 455 | 75.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16959105..16960095 | 1020..37 | 4640 | 99.3 | Minus |
| X | 23542271 | X | 15868656..15869054 | 360..758 | 420 | 73.7 | Plus |
| 2R | 25286936 | 2R | 7792392..7792784 | 768..376 | 405 | 73.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:00:41 has no hits.
FMO05324.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:20 Download gff for
FMO05324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9010-RA | 95..1112 | 32..1037 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:19:29 Download gff for
FMO05324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9010-RA | 47..1064 | 32..1037 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:40 Download gff for
FMO05324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9010-RA | 95..1112 | 32..1037 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:40 Download gff for
FMO05324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16959084..16960101 | 32..1037 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:20 Download gff for
FMO05324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12846589..12847606 | 32..1037 | 98 | | Minus |
