FMO05331.5prime Sequence
653 bp (427 high quality bases) assembled on 2008-08-22
> FMO05331.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCTGGAACTTAA
GCGTAGCCTGGACGCCAAGGGCCACTGCCTGTTGGAGATGCCCTCGGGAA
CGGGCAAGACGGCCACGCTGCTCTCCCTGATCGTTGCCTACATGGTGGAG
CATCCGGAAACGGTGCGCAAGCTCATCTACTGCTCGCGTACTGTTCCGGA
GATCGAGAAAGTGATCGCCGAGCTGCAGAACCTGATGGTTTACTACGAGC
GCCACTGCCCCAATCCACCACCCTTCACCGGTCTGGTGCTCAGCTCTAGG
AAGAACATGTGCATCCATCCGGAGGTCAGTAAGGAGCGCGAGGGCAAGGC
CGTGGACGGTAAATGTTACGGACTCACTGCCAGCTACATTTCGCGAACGG
CACGAGATGGACCACCGAGACGCCCATTTGCCAGTACTTTGAGGGATTTA
GCTTGAAAGGCAAGGAGTCCACATTGCCGGTCCGCGCCTACACATCCATT
GATCTTAAGGATACGGTCGGTCCGCGCAACTGGTGTCCCCTACTTTTTGC
TCCCATGCTATGGCCCTGCCCCCTTGGGGGATCAGTCCCCTTTCTTTAAT
CCGAAATTGCCAGTGTATCTAGAATGACCCCGCTCTGTGGGTTTGATAAG
CCA
FMO05331.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Xpd-RA | 2797 | CG9433-RA | 132..662 | 35..566 | 2350 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21171186..21171579 | 35..430 | 1880 | 99.5 | Plus |
| 2R | 25286936 | 2R | 21171631..21171740 | 430..539 | 305 | 89.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:53:37 has no hits.
FMO05331.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:24 Download gff for
FMO05331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Xpd-RA | 125..666 | 26..569 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:19:57 Download gff for
FMO05331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Xpd-RB | 143..684 | 26..569 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:54 Download gff for
FMO05331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Xpd-RA | 125..666 | 26..569 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:54 Download gff for
FMO05331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21171174..21171578 | 22..429 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:24 Download gff for
FMO05331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17058679..17059083 | 22..429 | 97 | -> | Plus |
