FMO05339.5prime Sequence
1218 bp (964 high quality bases) assembled on 2008-08-22
> FMO05339.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCGCCTTAA
GCTTCAGCCCATCACCTCCTCCAAAAGAAAACCCCAAGGAAAACCCCAAT
CCAGGAATAAAAACCACGTTGAAACCTTTTGGAAAGATTACCGTTCACAA
TGTTTTAAGTGAGAGTGGCGCCAACGCCTTGCAACAGCATATAGCCAATC
AGAACACCATTATTCGAAAGATCCGGGACTTTGGCATGCTGGGCGCTGTT
CAAAGTGCCGCAGCCAGCACAACTAACACCACACCCATATCCAGTCAACG
GAAGAGGCCCCTGGGAGAATCCCAAAAGCAGAACCGGCACAACCAGCAGA
ATCAACAGCTTAGTAAAACATCAGTGCCTGCTAAAAAATGCAAGACCAAC
AAGAAGTTGGCGGTTGAAAGGCCCCCAAAAGCAGGAACTATAAGCCACCC
TCATAAAAGCCAAAGCGATCAGAGTTTTGGGACTCCTGGAAGAAAGGGTT
TGCCTTTGCCACAAGCCGTTGCCCGTAGAAACGCTAGGGAAAGAAATCGC
GTGAAGCAGGTTAACAATGGATTTGCTTTACTCCGGGAGAAGATCCCAGA
AGAAGTATCTGAGGCTTTTGAGGCCCAGGGGGCGGGTAGAGGAGCAAGCA
AGAAGCTATCCAAAGTGGAGACCCTCCGCATGGCCGTAGAGTACATAAGA
AGTTTGGAAAAACTGCTGGGATTTGATTTTCCACCTCTCAACAGTCAGGG
AATAGTTCTGGTTCCGGCGATGATAGCTTTATGTTTATTAACGACGAATT
CGATTGTCTGGATGAACATTTCGACGACTCGCTGAGCAACTACGAAATGG
ATGAGCAACAGACTGTCCCACAAACTTTTATCCGAGGATATGCTAAACCC
TCCCAAGCCAGTGATCTCTGCCTAGTTTGACTACATTAAATGGGTTGCAA
TAATCAGAATACAAGACCACACCTACACTGCTGACGACTGACTATGGCGA
TTGAGTCACGAGCAAAACTGAAGAACAGCTGCTCGGCAGTATCGGATCGC
CGTGCAAAAAGTGTAGAGTCTGCCTTCCCCAGTCACTGTCGCCTGACTGA
TTGCGTTAAGAACAGACCTGTGCCAACCGGCACGCAAGTATCAACGGAAT
GCTCTGTCCATAGCGAGCCAAGCTAGATCGAGACACGCAAGTTCGACCTG
GAGTGTCGCATAATAACG
FMO05339.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ase-RA | 2430 | CG3258-RA | 210..1335 | 38..1125 | 4625 | 95.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 460956..461883 | 38..962 | 4365 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:28:55 has no hits.
FMO05339.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:19 Download gff for
FMO05339.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ase-RA | 210..1224 | 38..1036 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:20:09 Download gff for
FMO05339.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ase-RA | 457..1471 | 38..1036 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:55 Download gff for
FMO05339.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ase-RA | 210..1224 | 38..1036 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:55 Download gff for
FMO05339.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 460950..461990 | 33..1051 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:19 Download gff for
FMO05339.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 354983..356023 | 33..1051 | 97 | <- | Plus |
