FMO05347.5prime Sequence
409 bp (409 high quality bases) assembled on 2008-08-22
> FMO05347.5prime
AACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCTGATA
TGGAGATACAGAGCAACAAAATGTCAATAACGGAGGAAACACAAGTGACG
CGCAAGGAATGTGGAAAAAGGGGACGAAAACCAGGAAGAAAGACGTCTAC
TGAAAAATTGGACATGAAAGCCAAACTAGAACGCAGCAGACAAAGTGCCA
GGGAATGCCGGGCGCGCAAGAAGCTGCGGTATCAGTACCTGGAGGAACTG
GTGGCGGATCGGGAGAAGGCTGTAGTTGCTTTGCGTACGGAACTGGAGCG
CTTAATTCAATGGAATAACCAGTTGAGCGAAAGCAACACTCCAACCAACA
ATGACCAGTTACTTCAGGAACTCGGAATCCTCAAACAAGAAGCAAGCTTT
CTAGACCAT
FMO05347.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18619-RB | 627 | CG18619-RB | 84..434 | 41..391 | 1755 | 100 | Plus |
| CG18619-RA | 512 | CG18619-RA | 84..437 | 41..391 | 1715 | 99.2 | Plus |
| CG18619-RC | 516 | CG18619-RC | 84..438 | 41..391 | 1705 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10264762..10264885 | 178..301 | 620 | 100 | Plus |
| 2L | 23513712 | 2L | 10264947..10265036 | 302..391 | 450 | 100 | Plus |
| 2L | 23513712 | 2L | 10264551..10264633 | 97..179 | 415 | 100 | Plus |
| 2L | 23513712 | 2L | 10264208..10264264 | 41..97 | 285 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:45:47 has no hits.
FMO05347.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:38 Download gff for
FMO05347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18619-RB | 84..440 | 41..398 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:20:03 Download gff for
FMO05347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18619-RB | 78..434 | 41..398 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:40 Download gff for
FMO05347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18619-RB | 84..440 | 41..398 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:40 Download gff for
FMO05347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10264208..10264264 | 41..97 | 100 | -> | Plus |
| 2L | 10264552..10264633 | 98..179 | 100 | -> | Plus |
| 2L | 10264764..10264885 | 180..301 | 100 | -> | Plus |
| 2L | 10264947..10265042 | 302..398 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:38 Download gff for
FMO05347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10264208..10264264 | 41..97 | 100 | -> | Plus |
| arm_2L | 10264552..10264633 | 98..179 | 100 | -> | Plus |
| arm_2L | 10264764..10264885 | 180..301 | 100 | -> | Plus |
| arm_2L | 10264947..10265042 | 302..398 | 96 | | Plus |
