FMO05355.5prime Sequence
1017 bp (1017 high quality bases) assembled on 2008-08-22
> FMO05355.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCCCGAAAACTC
GGTGGTAGTCCAGTTAATGCAGGCCGTCGGCGGCGGAATCGCCGGAGCTG
CGACGCGGACCATAACCCAGCCGCTGGACGTTCTGAAGATCCGATTCCAG
ATGCAAGTGGAGCCGGTGACAAACCATAAGGGGTCCAAATACCGTGGAGT
CATCCACGCTTTCAAGTCGGTGTACGCCGAGGAGGGAATGCGCGGTATGT
TCCGTGGTCACAACTCCGGCCAGGTTCTGAGCATTTCGTACGCTCTGGTA
CAGTTCTGGTCCTACGAACAGCTTCGCTCCATGGCCCACCAGTTTGACTA
CTGGAGGGAGCGACCCTTTCTCATGTTTTTCATCTGCGGCGGCATAGCCG
GATGTCTGGGAGCCGTGGCCGCCCAGCCGTTCGACGTGGTAAGAACACAG
ATGGTGGCCGCAGACCCCTCCTCGCGCCGCAGTCAGATGAACACTTTTAC
CGGACTTCGAAAGGTCTATAAGATGGAGGGGTGGATGGGACTTTCCCGAG
GACTACCCTTCACGCTTGTGCAGGTGTTTCCGCTGGTAGAGGCAAACTTT
CTCTTCTACAAGTACCTCAACGCGGCTGTCTTGATGGCCAAGCCTCCCGA
CCAGCGCCAGGAAATCCACGGCGCATTTCTGTTTCTCAATGGGGCGCTGT
CAGGGGTGTTGGCCAAGATGATCGTGTACCCGGCGGACCTGCTTAAAAAG
CGCATCCAGCTGATGGCCTTCAAACAGGAACGTAAGACCTTTGGCCGCAA
CCCCGAGTGCCCTACGATCCTGGGCTGCATCACCACCACGTTTCGGGAGG
AAGGAATCGGAAGCTTCTATAAGGAATGTTGCCTACTCTACTCAAGGCAG
GACTGATGAGTGCCGTGTACTTCTCCATCTATGACATGTTTAAGCGCCCT
ATATAGCTCGATGAAAGAGCGGAGAAAATCGGCAAAACTGGGAAAGCATG
CAAGCTTTCTAGACCAT
FMO05355.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tpc2-RB | 2769 | CG2857-RB | 231..1199 | 37..999 | 4635 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24899569..24900504 | 969..37 | 4485 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:46:07 has no hits.
FMO05355.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:54 Download gff for
FMO05355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tpc2-RB | 225..1199 | 29..999 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:20:32 Download gff for
FMO05355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2857-RA | 159..1133 | 29..999 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:48 Download gff for
FMO05355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tpc2-RB | 225..1199 | 29..999 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:48 Download gff for
FMO05355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24899536..24900510 | 29..999 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:54 Download gff for
FMO05355.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20787059..20788033 | 29..999 | 98 | | Minus |
