Clone FMO05361 Report

Search the DGRC for FMO05361

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:53
Well:61
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05361.5prime Sequence

303 bp (303 high quality bases) assembled on 2008-08-22

> FMO05361.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGATCCAGGATTC
GCCGCAGGAGCGTCGCAGGACGAGTCGCCGGCGCAGTCAGAAGCATCACC
GCTGGAAAAAAACACAGCCTATACGAAACACACAGTGCAACAGCAACAGC
AACAACAGCAACACAACCAACCAACCAACCAACAAGAACGACTTAACGGA
GCTAGAAAAGCAGCCGACCACTGGCGATCAACGCAGCCCATCCTCAGCCC
GCCACTCAACTGCGCCAGCCCTTCGACTTCGAGGCGCAAGCTTTCTAGAC
CAT

FMO05361.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG42784-RI 5345 CG42784-RI 1341..1589 37..285 1245 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13484360..13484608 37..285 1245 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:48:15 has no hits.

FMO05361.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:51:14 Download gff for FMO05361.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42784-RI 1341..1595 37..291 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:23:15 Download gff for FMO05361.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31846-RA 1334..1588 37..291 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:47 Download gff for FMO05361.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42784-RI 1341..1595 37..291 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:47 Download gff for FMO05361.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 13484360..13484615 37..292 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:51:14 Download gff for FMO05361.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13484360..13484615 37..292 98 -> Plus